Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC008739.2-201ENST00000597006 317 ntBASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 uc_338.14-201ENST00000613162 166 ntBASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 MIR3651-201ENST00000630427 90 ntBASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCRAQ6ISU1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 RNA5SP97-201ENST00000365006 84 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 Y_RNA.323-201ENST00000365157 109 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 BX510359.1-201ENST00000456973 237 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 RNU7-14P-201ENST00000459331 62 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 AC108751.2-201ENST00000469993 231 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 RPL36AP48-201ENST00000485521 314 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 RNA5SP446-201ENST00000515955 82 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 AL136360.1-201ENST00000503377 1900 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 AC058791.1-201ENST00000608412 3198 ntBASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCRAQ6ISU1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 Y_RNA.66-201ENST00000362862 102 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 Y_RNA.796-201ENST00000364268 102 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 Y_RNA.799-201ENST00000364992 102 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC008134.1-201ENST00000420943 193 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 CALM2P4-201ENST00000430810 426 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC018634.1-201ENST00000437554 401 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 RPL29P14-201ENST00000495837 428 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 RPL23AP94-201ENST00000512518 302 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 RNA5SP236-201ENST00000516169 116 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 RNU6-948P-201ENST00000516374 107 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 RN7SKP57-201ENST00000517248 293 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC027419.1-201ENST00000522976 328 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC007751.1-201ENST00000529260 376 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC025627.2-201ENST00000576220 160 ntBASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCRAQ6ISU1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 RNU6-1209P-201ENST00000363655 107 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 Y_RNA.486-201ENST00000384398 107 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 SNORA48.2-201ENST00000390926 124 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 RNU6-1275P-201ENST00000391087 107 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 RNA5SP354-201ENST00000391247 136 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 RNU6-57P-201ENST00000411348 103 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 AC007064.1-201ENST00000412238 351 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 AC080013.2-201ENST00000460866 323 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 AC008155.2-201ENST00000464337 397 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 RN7SKP46-201ENST00000515942 234 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 RNA5SP179-201ENST00000517284 121 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 AC002064.3-201ENST00000623448 346 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 AL589743.1-201ENST00000551932 2712 ntBASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCRAQ6ISU1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 Y_RNA.549-201ENST00000384657 102 ntBASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 MIR921-201ENST00000401133 56 ntBASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 AL049873.1-201ENST00000480540 376 ntBASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 AC091167.4-201ENST00000605079 184 ntBASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 AL596211.1-201ENST00000569873 2277 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms