Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL356575.1-201ENST00000603008 283 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 uc_338.32-201ENST00000615087 172 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 AC012640.5-201ENST00000623897 319 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF43Q68DV7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF43Q68DV7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF43Q68DV7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
RNF43Q68DV7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF43Q68DV7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.78□□□□□ -1.8
RNF43Q68DV7 MIR128-1-201ENST00000384921 82 ntBASIC3.78□□□□□ -1.8
RNF43Q68DV7 RNU6-1228P-201ENST00000391014 107 ntBASIC3.78□□□□□ -1.8
RNF43Q68DV7 HMGN2P30-201ENST00000423237 256 ntBASIC3.78□□□□□ -1.8
RNF43Q68DV7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF43Q68DV7 RNU6-772P-201ENST00000516042 105 ntBASIC3.78□□□□□ -1.8
RNF43Q68DV7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF43Q68DV7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF43Q68DV7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF43Q68DV7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF43Q68DV7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF43Q68DV7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF43Q68DV7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RNU6-728P-201ENST00000365375 104 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 U3.26-201ENST00000391236 204 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 SNORA75.5-201ENST00000391291 81 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 MIR208B-201ENST00000401172 77 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RNA5SP239-201ENST00000410218 129 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RNU6-855P-201ENST00000410395 104 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RNU6-710P-201ENST00000410424 105 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF43Q68DV7 AL714022.1-201ENST00000439897 151 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RPL37P4-201ENST00000448908 268 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RBMY2UP-201ENST00000453474 324 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RNU7-141P-201ENST00000459304 62 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 AP001486.1-201ENST00000463339 476 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 RPL31P41-201ENST00000477967 372 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 AC103975.1-201ENST00000482506 483 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF43Q68DV7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.77□□□□□ -1.81
RNF43Q68DV7 RPL23AP94-201ENST00000512518 302 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 Y_RNA.694-201ENST00000516677 117 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 MIR8058-201ENST00000615737 89 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 U6.95-201ENST00000636931 70 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RNF43Q68DV7 ADAM3A-203ENST00000461344 2157 ntBASIC3.77□□□□□ -1.81
RNF43Q68DV7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RNF43Q68DV7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF43Q68DV7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RNF43Q68DV7 RNU6-1082P-201ENST00000364574 107 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 RNU6-217P-201ENST00000384164 104 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RNF43Q68DV7 MIR320B2-201ENST00000408479 138 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 AC006539.3-201ENST00000454258 129 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 SNORD33.1-201ENST00000516213 88 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 RNU6-581P-201ENST00000516214 105 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF43Q68DV7 CYP4A27P-201ENST00000567218 190 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 AC009163.5-201ENST00000575421 637 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 MIR3121-201ENST00000579680 77 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 SNRPGP20-201ENST00000604477 205 ntBASIC3.76□□□□□ -1.81
RNF43Q68DV7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF43Q68DV7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 SNORD9-201ENST00000362566 104 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 RNU6-884P-201ENST00000363889 107 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 Y_RNA.310-201ENST00000365063 113 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 MIR490-201ENST00000384865 128 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AL512604.1-201ENST00000404812 257 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF43Q68DV7 AIMP1P2-201ENST00000425294 312 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AC006989.1-201ENST00000427212 131 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 AC115115.1-201ENST00000449927 248 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 RPL21P10-201ENST00000463521 490 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 RN7SL807P-201ENST00000470923 297 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 Vault.1-201ENST00000516474 102 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 Y_RNA.757-201ENST00000578934 114 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 MIR4724-201ENST00000579485 89 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 MIR5688-201ENST00000580619 83 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AL451007.1-201ENST00000595491 289 ntBASIC3.75□□□□□ -1.81
RNF43Q68DV7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF43Q68DV7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF43Q68DV7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF43Q68DV7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF43Q68DV7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF43Q68DV7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF43Q68DV7 SNORA38.1-201ENST00000364172 131 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 SNORD87-201ENST00000364849 89 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms