Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 VWA8P1-201ENST00000510889 176 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNY4P20-201ENST00000516678 93 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-63P-201ENST00000516690 95 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 SCARNA15-202ENST00000516881 127 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 uc_338.32-201ENST00000615087 172 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 RNY3P2-201ENST00000362918 102 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 SNORD66.1-201ENST00000391230 76 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 MIR1911-201ENST00000410783 80 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 EIF4EP4-201ENST00000424916 578 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 SNORD65B-201ENST00000459126 73 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1018P-201ENST00000516577 106 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 AC107934.2-201ENST00000518653 310 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 AC022254.1-201ENST00000567857 235 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 AC034105.4-201ENST00000568304 277 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-91P-201ENST00000607774 107 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 AL162726.3-218ENST00000636401 95 ntBASIC3.84□□□□□ -1.79
RNFT1Q5M7Z0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNFT1Q5M7Z0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.84□□□□□ -1.8
RNFT1Q5M7Z0 MAPK10-303ENST00000641324 3959 ntBASIC3.84□□□□□ -1.8
RNFT1Q5M7Z0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 SNORA51.4-201ENST00000364993 124 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 RNU1-44P-201ENST00000384453 163 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 MIR548D2-201ENST00000384955 97 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 SNORD96B-201ENST00000386148 79 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-628P-201ENST00000410675 107 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AL162151.2-201ENST00000448875 158 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 RNU7-171P-201ENST00000459581 62 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-240P-201ENST00000516098 97 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AC006064.5-201ENST00000541782 248 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 MIR5588-201ENST00000581890 63 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AC005086.4-201ENST00000623065 213 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AC007496.3-201ENST00000624987 3443 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 AC092435.4-201ENST00000623012 4159 ntBASIC3.83□□□□□ -1.8
RNFT1Q5M7Z0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-776P-201ENST00000364403 104 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-1022P-201ENST00000365049 104 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-117P-201ENST00000365415 107 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 HSPE1P26-201ENST00000405341 275 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 RPL21P65-201ENST00000406094 466 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 RPS29P20-201ENST00000489592 171 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 RPS15AP11-201ENST00000594193 385 ntBASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RNFT1Q5M7Z0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 Y_RNA.313-201ENST00000365095 103 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 SNORD24-201ENST00000383884 75 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 MIR181A2-201ENST00000384863 110 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 MIR493-201ENST00000385254 89 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 MT-TI-201ENST00000387365 69 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 RNA5SP354-201ENST00000391247 136 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AL451046.2-201ENST00000403074 277 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 MIR1912-201ENST00000410389 80 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms