Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 AC010095.1-201ENST00000443543 144 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 SNORD109B-201ENST00000458961 67 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 SNORD109A-201ENST00000459128 67 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 RNU2-53P-201ENST00000516257 147 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 RNU6-388P-201ENST00000517012 105 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 RNU6-389P-201ENST00000517048 105 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 MIR4300-201ENST00000581016 96 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 MIR3668-201ENST00000582138 75 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 MTND5P6-201ENST00000422338 1798 ntBASIC3.15□□□□□ -1.9
CCDC178Q5BJE1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC178Q5BJE1 RNU6-727P-201ENST00000363592 107 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 RNU6-280P-201ENST00000364145 104 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.447-201ENST00000384184 113 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 RNU1-57P-201ENST00000384491 166 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 RNA5SP213-201ENST00000391031 106 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 CYCSP48-201ENST00000417124 323 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AC096920.1-201ENST00000423991 241 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AC108059.2-201ENST00000434626 151 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 RNU6-408P-201ENST00000515910 100 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AC023157.2-201ENST00000540596 141 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 MIR4765-201ENST00000585007 77 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC178Q5BJE1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC062016.1-201ENST00000355719 319 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.84-201ENST00000363011 104 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 VTRNA1-1-201ENST00000363120 99 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 RNU6-1210P-201ENST00000363775 107 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 RNU2-25P-201ENST00000411041 191 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 SNORD127-201ENST00000458892 86 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC145146.1-201ENST00000496370 254 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC025465.3-201ENST00000510570 311 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 RN7SKP49-201ENST00000516675 260 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 RNA5SP54-201ENST00000516951 92 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 MIR4319-201ENST00000577285 85 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AL670379.2-201ENST00000604983 252 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 AC010999.1-201ENST00000611856 324 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 uc_338.14-201ENST00000613162 166 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 LINC02555-201ENST00000563933 1951 ntBASIC3.14□□□□□ -1.91
CCDC178Q5BJE1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 SNORD113-8-201ENST00000363497 74 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 RNU6-379P-201ENST00000363813 104 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.489-201ENST00000384410 101 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 MIR329-1-201ENST00000385028 80 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 MT-TG-201ENST00000387429 68 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 MIR1289-1-201ENST00000408836 144 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 AIMP1P2-201ENST00000425294 312 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 UBBP3-201ENST00000445497 241 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 AL121594.1-201ENST00000475906 575 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 RNA5SP282-201ENST00000516355 108 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 HSPE1P18-201ENST00000517602 280 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 DEFB108E-201ENST00000524692 240 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 MIR3128-201ENST00000581957 66 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 AC090517.3-201ENST00000625170 141 ntBASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC178Q5BJE1 AL359854.1-201ENST00000614203 1594 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.14-201ENST00000362415 103 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 snoU2_19.2-201ENST00000363024 80 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 RNU6-799P-201ENST00000363567 107 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 RNU6-137P-201ENST00000363680 108 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 SNORD115-8-201ENST00000363856 82 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 SNORD115-38-201ENST00000365037 82 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.350-201ENST00000365409 98 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 SNORD115-46-201ENST00000390982 71 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.595-201ENST00000410403 105 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 RPS26P42-201ENST00000413485 326 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms