Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.15□□□□□ -1.91
GFRA1P56159 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.15□□□□□ -1.91
GFRA1P56159 MIR3944-201ENST00000581277 108 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.15□□□□□ -1.91
GFRA1P56159 snoU18.1-201ENST00000629629 71 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 AC244205.2-202ENST00000635781 342 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 U6.115-201ENST00000636045 103 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
GFRA1P56159 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GFRA1P56159 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
GFRA1P56159 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GFRA1P56159 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
GFRA1P56159 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 RNU6-211P-201ENST00000384047 107 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 RNU6-886P-201ENST00000384319 105 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 MIR1185-2-201ENST00000408687 86 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 SUMO1P3-201ENST00000439961 304 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 AC091153.1-201ENST00000466297 402 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.14□□□□□ -1.91
GFRA1P56159 AC023141.11-201ENST00000508864 202 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
GFRA1P56159 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
GFRA1P56159 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.14□□□□□ -1.91
GFRA1P56159 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.14□□□□□ -1.91
GFRA1P56159 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.14□□□□□ -1.91
GFRA1P56159 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
GFRA1P56159 CEP170P1-201ENST00000502249 4587 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.13□□□□□ -1.91
GFRA1P56159 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.13□□□□□ -1.91
GFRA1P56159 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
GFRA1P56159 RNA5SP72-201ENST00000364442 117 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 Y_RNA.262-201ENST00000364641 102 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 SNORD31B-201ENST00000364977 69 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 PRSS3P4-201ENST00000453323 162 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 RNU7-57P-201ENST00000459540 60 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 AC008155.2-201ENST00000464337 397 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 AC090515.1-201ENST00000465295 476 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 AL049830.2-201ENST00000480072 201 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 AC107393.1-201ENST00000512403 346 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 SNORA70.12-201ENST00000516084 153 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.13□□□□□ -1.91
GFRA1P56159 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.13□□□□□ -1.91
GFRA1P56159 AC026333.2-201ENST00000542164 106 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.13□□□□□ -1.91
GFRA1P56159 AC072026.1-201ENST00000605023 201 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GFRA1P56159 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
GFRA1P56159 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
GFRA1P56159 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
GFRA1P56159 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
GFRA1P56159 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
GFRA1P56159 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.12□□□□□ -1.91
GFRA1P56159 SNORD46.1-201ENST00000364139 104 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 Y_RNA.304-201ENST00000365011 112 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 RNA5SP240-201ENST00000365355 128 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 MIR34B-201ENST00000385076 84 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.12□□□□□ -1.91
GFRA1P56159 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
GFRA1P56159 AL161788.1-201ENST00000441805 169 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.12□□□□□ -1.91
GFRA1P56159 ATP5EP1-201ENST00000510257 156 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 RNU6-1231P-201ENST00000517185 103 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.12□□□□□ -1.91
GFRA1P56159 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
GFRA1P56159 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
GFRA1P56159 MIR3186-201ENST00000577404 85 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 AL365434.2-201ENST00000607979 234 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 snoZ196.1-201ENST00000625269 89 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
GFRA1P56159 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.12□□□□□ -1.91
GFRA1P56159 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFRA1P56159 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
GFRA1P56159 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
GFRA1P56159 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GFRA1P56159 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GFRA1P56159 Y_RNA.308-201ENST00000365043 101 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 SNORA70.4-201ENST00000365509 134 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 RNU6-438P-201ENST00000365561 103 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 RNU6-546P-201ENST00000383991 107 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 AL139095.1-201ENST00000404326 391 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 COX6CP10-201ENST00000416832 224 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 snoU13.22-201ENST00000459428 104 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.11□□□□□ -1.91
GFRA1P56159 RNU6-965P-201ENST00000516721 96 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 RN7SKP40-201ENST00000517211 242 ntBASIC3.11□□□□□ -1.91
GFRA1P56159 IGKV2-26-201ENST00000518305 343 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms