Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.65□□□□□ -1.99
SUMO3P55854 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SUMO3P55854 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.65□□□□□ -1.99
SUMO3P55854 RNU6-727P-201ENST00000363592 107 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 SNORA26.7-201ENST00000391288 122 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 MIR887-201ENST00000401258 79 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 RPEP5-201ENST00000441137 268 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 AC073910.1-201ENST00000445047 438 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 UQCRBP2-201ENST00000447827 297 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 NDUFB4P10-201ENST00000452541 359 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SUMO3P55854 AC067942.3-201ENST00000512025 362 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 SCGB1D5P-201ENST00000515134 247 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 SNORA40.9-201ENST00000515895 93 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.64□□□□□ -1.99
SUMO3P55854 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.64□□□□□ -1.99
SUMO3P55854 AC136443.5-201ENST00000603741 370 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 AC005034.5-201ENST00000604219 466 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 Y_RNA.772-201ENST00000606692 102 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 AL078596.1-201ENST00000624856 447 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 AC008873.1-201ENST00000625051 138 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SUMO3P55854 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SUMO3P55854 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
SUMO3P55854 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.64□□□□□ -1.99
SUMO3P55854 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SUMO3P55854 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SUMO3P55854 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.64□□□□□ -1.99
SUMO3P55854 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.64□□□□□ -1.99
SUMO3P55854 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
SUMO3P55854 Y_RNA.153-201ENST00000363615 91 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 SNORA51.4-201ENST00000364993 124 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 RNU6-438P-201ENST00000365561 103 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 Y_RNA.415-201ENST00000384012 112 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 RNU6-926P-201ENST00000384075 107 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 MIR491-201ENST00000384877 84 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 MIR592-201ENST00000384959 97 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 SNORA48.5-201ENST00000391143 135 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 MIR1283-1-201ENST00000408494 87 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 RNA5SP504-201ENST00000410676 117 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.63□□□□□ -1.99
SUMO3P55854 AL451074.5-201ENST00000415894 435 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 AC244505.4-201ENST00000434905 287 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.63□□□□□ -1.99
SUMO3P55854 SSXP5-201ENST00000443473 287 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.63□□□□□ -1.99
SUMO3P55854 S100A11P2-201ENST00000467589 312 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 AP004217.1-201ENST00000480579 346 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 SCARNA13-201ENST00000516672 275 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 RNU1-117P-201ENST00000517041 158 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 RNA5SP490-201ENST00000517141 136 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 AC090115.4-201ENST00000609970 188 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.63□□□□□ -1.99
SUMO3P55854 AL357075.2-201ENST00000614906 189 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 AC091953.5-201ENST00000622919 233 ntBASIC2.63□□□□□ -1.99
SUMO3P55854 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.63□□□□□ -1.99
SUMO3P55854 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.62□□□□□ -1.99
SUMO3P55854 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SUMO3P55854 RNU6-545P-201ENST00000362681 104 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 RNU1-35P-201ENST00000362782 153 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 RNU6-743P-201ENST00000364151 106 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 RNA5SP387-201ENST00000364226 106 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 Y_RNA.333-201ENST00000365274 102 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 Y_RNA.439-201ENST00000384119 94 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 SNORA9-201ENST00000384215 133 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 MIR512-1-201ENST00000384913 84 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 ELOCP21-201ENST00000412558 336 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 BMS1P22-201ENST00000414726 313 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.62□□□□□ -1.99
SUMO3P55854 AC016925.1-201ENST00000458303 298 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 AC093259.1-201ENST00000509755 300 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.62□□□□□ -1.99
SUMO3P55854 AC007536.1-201ENST00000533382 349 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 CYCSP26-201ENST00000534107 320 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 AC018448.1-201ENST00000552843 316 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 MIR4753-201ENST00000585119 83 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.62□□□□□ -1.99
SUMO3P55854 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.62□□□□□ -1.99
SUMO3P55854 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SUMO3P55854 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
SUMO3P55854 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SUMO3P55854 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.61□□□□□ -1.99
SUMO3P55854 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 RNU6-1305P-201ENST00000364353 104 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 Y_RNA.276-201ENST00000364732 109 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 Y_RNA.459-201ENST00000384251 102 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 Y_RNA.498-201ENST00000384460 102 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 SRIP3-201ENST00000413200 219 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 DPH3P2-201ENST00000422618 250 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 AL139132.1-201ENST00000431587 344 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 AL137159.1-201ENST00000452808 512 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 AC114982.1-201ENST00000469402 321 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 RPL26P26-201ENST00000480251 434 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.61□□□□□ -1.99
SUMO3P55854 AC131281.1-201ENST00000522984 164 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms