Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MTCO3P10-201ENST00000455912 772 ntBASIC2.6□□□□□ -1.99
NEK3P51956 AC022493.2-201ENST00000506122 481 ntBASIC2.6□□□□□ -1.99
NEK3P51956 RNU6-470P-201ENST00000515954 104 ntBASIC2.6□□□□□ -1.99
NEK3P51956 RNU7-4P-201ENST00000516961 62 ntBASIC2.6□□□□□ -1.99
NEK3P51956 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
NEK3P51956 RNU2-19P-201ENST00000517288 84 ntBASIC2.6□□□□□ -1.99
NEK3P51956 CYCSP23-201ENST00000519781 313 ntBASIC2.6□□□□□ -1.99
NEK3P51956 RAB11AP2-201ENST00000545905 639 ntBASIC2.6□□□□□ -1.99
NEK3P51956 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.6□□□□□ -1.99
NEK3P51956 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
NEK3P51956 AC080078.3-201ENST00000605407 463 ntBASIC2.6□□□□□ -1.99
NEK3P51956 AC025754.2-201ENST00000606491 432 ntBASIC2.6□□□□□ -1.99
NEK3P51956 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.6□□□□□ -1.99
NEK3P51956 AC130454.1-201ENST00000622948 401 ntBASIC2.6□□□□□ -1.99
NEK3P51956 AC012640.5-201ENST00000623897 319 ntBASIC2.6□□□□□ -1.99
NEK3P51956 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
NEK3P51956 MTND4LP32-201ENST00000636111 270 ntBASIC2.6□□□□□ -1.99
NEK3P51956 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEK3P51956 LINC02555-201ENST00000563933 1951 ntBASIC2.6□□□□□ -1.99
NEK3P51956 RNU6-490P-201ENST00000362985 107 ntBASIC2.59□□□□□ -1.99
NEK3P51956 Y_RNA.315-201ENST00000365117 102 ntBASIC2.59□□□□□ -1.99
NEK3P51956 MIR487A-201ENST00000385009 80 ntBASIC2.59□□□□□ -1.99
NEK3P51956 MIR10B-201ENST00000385011 110 ntBASIC2.59□□□□□ -1.99
NEK3P51956 MIR625-201ENST00000385047 85 ntBASIC2.59□□□□□ -1.99
NEK3P51956 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.59□□□□□ -1.99
NEK3P51956 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
NEK3P51956 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
NEK3P51956 SNRPEP8-201ENST00000442866 260 ntBASIC2.59□□□□□ -1.99
NEK3P51956 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
NEK3P51956 AL357134.1-201ENST00000445848 426 ntBASIC2.59□□□□□ -1.99
NEK3P51956 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
NEK3P51956 NDUFB4P10-201ENST00000452541 359 ntBASIC2.59□□□□□ -1.99
NEK3P51956 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.59□□□□□ -1.99
NEK3P51956 RRN3P3-201ENST00000549207 578 ntBASIC2.59□□□□□ -1.99
NEK3P51956 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.59□□□□□ -1.99
NEK3P51956 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.59□□□□□ -1.99
NEK3P51956 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
NEK3P51956 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
NEK3P51956 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NEK3P51956 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
NEK3P51956 Y_RNA.67-201ENST00000362870 100 ntBASIC2.58□□□□□ -2
NEK3P51956 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
NEK3P51956 RNU6-793P-201ENST00000384233 104 ntBASIC2.58□□□□□ -2
NEK3P51956 Y_RNA.604-201ENST00000410574 102 ntBASIC2.58□□□□□ -2
NEK3P51956 AC092423.1-201ENST00000430165 186 ntBASIC2.58□□□□□ -2
NEK3P51956 MTND2P29-201ENST00000438595 412 ntBASIC2.58□□□□□ -2
NEK3P51956 AC099799.1-201ENST00000439809 192 ntBASIC2.58□□□□□ -2
NEK3P51956 AC067942.3-201ENST00000512025 362 ntBASIC2.58□□□□□ -2
NEK3P51956 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.58□□□□□ -2
NEK3P51956 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
NEK3P51956 AC084781.2-201ENST00000615568 161 ntBASIC2.58□□□□□ -2
NEK3P51956 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
NEK3P51956 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
NEK3P51956 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
NEK3P51956 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.58□□□□□ -2
NEK3P51956 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.57□□□□□ -2
NEK3P51956 MTND5P16-201ENST00000460269 1703 ntBASIC2.57□□□□□ -2
NEK3P51956 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NEK3P51956 RNU6-1040P-201ENST00000383974 107 ntBASIC2.57□□□□□ -2
NEK3P51956 Y_RNA.431-201ENST00000384086 102 ntBASIC2.57□□□□□ -2
NEK3P51956 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
NEK3P51956 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NEK3P51956 AC004866.1-201ENST00000411748 78 ntBASIC2.57□□□□□ -2
NEK3P51956 WARS2P1-201ENST00000429678 537 ntBASIC2.57□□□□□ -2
NEK3P51956 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.57□□□□□ -2
NEK3P51956 AC055731.1-201ENST00000474387 401 ntBASIC2.57□□□□□ -2
NEK3P51956 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
NEK3P51956 RNU6-948P-201ENST00000516374 107 ntBASIC2.57□□□□□ -2
NEK3P51956 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.57□□□□□ -2
NEK3P51956 AC007229.1-201ENST00000590455 412 ntBASIC2.57□□□□□ -2
NEK3P51956 AC010999.1-201ENST00000611856 324 ntBASIC2.57□□□□□ -2
NEK3P51956 AC068205.3-201ENST00000636385 468 ntBASIC2.57□□□□□ -2
NEK3P51956 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
NEK3P51956 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
NEK3P51956 AC008555.8-201ENST00000623602 2168 ntBASIC2.56□□□□□ -2
NEK3P51956 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NEK3P51956 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NEK3P51956 RNU6-545P-201ENST00000362681 104 ntBASIC2.56□□□□□ -2
NEK3P51956 RNU4-79P-201ENST00000362764 141 ntBASIC2.56□□□□□ -2
NEK3P51956 Y_RNA.146-201ENST00000363549 102 ntBASIC2.56□□□□□ -2
NEK3P51956 Y_RNA.179-201ENST00000363844 90 ntBASIC2.56□□□□□ -2
NEK3P51956 RNU6-99P-201ENST00000364721 107 ntBASIC2.56□□□□□ -2
NEK3P51956 RNU6-281P-201ENST00000384212 103 ntBASIC2.56□□□□□ -2
NEK3P51956 SNORA67.2-201ENST00000384300 149 ntBASIC2.56□□□□□ -2
NEK3P51956 RNA5SP213-201ENST00000391031 106 ntBASIC2.56□□□□□ -2
NEK3P51956 EIF1P2-201ENST00000428233 350 ntBASIC2.56□□□□□ -2
NEK3P51956 MTCO1P44-201ENST00000441935 243 ntBASIC2.56□□□□□ -2
NEK3P51956 IPO7P1-201ENST00000442031 636 ntBASIC2.56□□□□□ -2
NEK3P51956 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.56□□□□□ -2
NEK3P51956 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.56□□□□□ -2
NEK3P51956 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
NEK3P51956 Y_RNA.675-201ENST00000516389 149 ntBASIC2.56□□□□□ -2
NEK3P51956 AC144568.1-201ENST00000520139 137 ntBASIC2.56□□□□□ -2
NEK3P51956 AC093027.1-201ENST00000546698 429 ntBASIC2.56□□□□□ -2
NEK3P51956 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.56□□□□□ -2
NEK3P51956 MIR4435-1-201ENST00000582552 80 ntBASIC2.56□□□□□ -2
NEK3P51956 MIR4795-201ENST00000584182 89 ntBASIC2.56□□□□□ -2
NEK3P51956 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
NEK3P51956 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
NEK3P51956 AC005296.1-201ENST00000616145 209 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms