Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SNORD32B-201ENST00000364460 84 ntBASIC2.38□□□□□ -2.03
CENPAP49450 SNORD115-38-201ENST00000365037 82 ntBASIC2.38□□□□□ -2.03
CENPAP49450 SNORA18.2-201ENST00000383865 132 ntBASIC2.38□□□□□ -2.03
CENPAP49450 RNU6-546P-201ENST00000383991 107 ntBASIC2.38□□□□□ -2.03
CENPAP49450 RNU6-159P-201ENST00000391080 106 ntBASIC2.38□□□□□ -2.03
CENPAP49450 AL590004.1-201ENST00000405321 300 ntBASIC2.38□□□□□ -2.03
CENPAP49450 RNU2-32P-201ENST00000411193 191 ntBASIC2.38□□□□□ -2.03
CENPAP49450 CBX3P6-201ENST00000430257 527 ntBASIC2.38□□□□□ -2.03
CENPAP49450 AC112220.1-201ENST00000434628 355 ntBASIC2.38□□□□□ -2.03
CENPAP49450 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
CENPAP49450 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.38□□□□□ -2.03
CENPAP49450 AC007215.1-201ENST00000464893 276 ntBASIC2.38□□□□□ -2.03
CENPAP49450 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.38□□□□□ -2.03
CENPAP49450 RNU6-1114P-201ENST00000516022 107 ntBASIC2.38□□□□□ -2.03
CENPAP49450 SNORA25.14-201ENST00000516481 132 ntBASIC2.38□□□□□ -2.03
CENPAP49450 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.38□□□□□ -2.03
CENPAP49450 AC040896.1-201ENST00000613819 479 ntBASIC2.38□□□□□ -2.03
CENPAP49450 AL606534.2-204ENST00000635008 178 ntBASIC2.38□□□□□ -2.03
CENPAP49450 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CENPAP49450 Y_RNA.80-201ENST00000362996 102 ntBASIC2.37□□□□□ -2.03
CENPAP49450 Y_RNA.148-201ENST00000363557 117 ntBASIC2.37□□□□□ -2.03
CENPAP49450 RNU6-873P-201ENST00000363833 107 ntBASIC2.37□□□□□ -2.03
CENPAP49450 RNU6-280P-201ENST00000364145 104 ntBASIC2.37□□□□□ -2.03
CENPAP49450 RNU6-26P-201ENST00000383985 107 ntBASIC2.37□□□□□ -2.03
CENPAP49450 Y_RNA.485-201ENST00000384395 102 ntBASIC2.37□□□□□ -2.03
CENPAP49450 MIR128-1-201ENST00000384921 82 ntBASIC2.37□□□□□ -2.03
CENPAP49450 MIR561-201ENST00000385216 97 ntBASIC2.37□□□□□ -2.03
CENPAP49450 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CENPAP49450 U8.22-201ENST00000459141 133 ntBASIC2.37□□□□□ -2.03
CENPAP49450 S100A11P2-201ENST00000467589 312 ntBASIC2.37□□□□□ -2.03
CENPAP49450 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
CENPAP49450 RNU4-77P-201ENST00000516692 156 ntBASIC2.37□□□□□ -2.03
CENPAP49450 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.37□□□□□ -2.03
CENPAP49450 AC026470.2-201ENST00000561492 181 ntBASIC2.37□□□□□ -2.03
CENPAP49450 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.37□□□□□ -2.03
CENPAP49450 MIR5006-201ENST00000583027 110 ntBASIC2.37□□□□□ -2.03
CENPAP49450 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.37□□□□□ -2.03
CENPAP49450 AC005562.2-201ENST00000618264 111 ntBASIC2.37□□□□□ -2.03
CENPAP49450 SCARNA15.3-201ENST00000626315 122 ntBASIC2.37□□□□□ -2.03
CENPAP49450 SCARNA4.1-201ENST00000628597 123 ntBASIC2.37□□□□□ -2.03
CENPAP49450 MIR4272-201ENST00000635924 64 ntBASIC2.37□□□□□ -2.03
CENPAP49450 BX322639.1-202ENST00000423987 2213 ntBASIC2.37□□□□□ -2.03
CENPAP49450 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CENPAP49450 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CENPAP49450 RNU1-23P-201ENST00000363361 144 ntBASIC2.36□□□□□ -2.03
CENPAP49450 RNU6-743P-201ENST00000364151 106 ntBASIC2.36□□□□□ -2.03
CENPAP49450 SNORA44-201ENST00000384584 132 ntBASIC2.36□□□□□ -2.03
CENPAP49450 MIR10B-201ENST00000385011 110 ntBASIC2.36□□□□□ -2.03
CENPAP49450 RNU1-139P-201ENST00000391307 165 ntBASIC2.36□□□□□ -2.03
CENPAP49450 RNA5SP181-201ENST00000410246 98 ntBASIC2.36□□□□□ -2.03
CENPAP49450 AC004386.2-201ENST00000441858 148 ntBASIC2.36□□□□□ -2.03
CENPAP49450 CHEK2P4-201ENST00000450340 246 ntBASIC2.36□□□□□ -2.03
CENPAP49450 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.36□□□□□ -2.03
CENPAP49450 AC107032.1-201ENST00000485945 480 ntBASIC2.36□□□□□ -2.03
CENPAP49450 RNU5F-4P-201ENST00000516581 114 ntBASIC2.36□□□□□ -2.03
CENPAP49450 RNU2-44P-201ENST00000516795 194 ntBASIC2.36□□□□□ -2.03
CENPAP49450 SNORA48.11-201ENST00000517015 89 ntBASIC2.36□□□□□ -2.03
CENPAP49450 AC093023.1-201ENST00000547375 507 ntBASIC2.36□□□□□ -2.03
CENPAP49450 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.36□□□□□ -2.03
CENPAP49450 VN1R91P-201ENST00000594377 169 ntBASIC2.36□□□□□ -2.03
CENPAP49450 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.36□□□□□ -2.03
CENPAP49450 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.36□□□□□ -2.03
CENPAP49450 AC007742.2-201ENST00000618226 398 ntBASIC2.36□□□□□ -2.03
CENPAP49450 AL138825.1-201ENST00000618587 192 ntBASIC2.36□□□□□ -2.03
CENPAP49450 AC243829.7-201ENST00000633081 225 ntBASIC2.36□□□□□ -2.03
CENPAP49450 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
CENPAP49450 MTND4P1-201ENST00000457501 1466 ntBASIC2.36□□□□□ -2.03
CENPAP49450 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CENPAP49450 AC005592.1-201ENST00000566527 1640 ntBASIC2.35□□□□□ -2.03
CENPAP49450 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CENPAP49450 RNU5F-3P-201ENST00000363767 117 ntBASIC2.35□□□□□ -2.03
CENPAP49450 MIR95-201ENST00000385072 81 ntBASIC2.35□□□□□ -2.03
CENPAP49450 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CENPAP49450 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
CENPAP49450 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.35□□□□□ -2.03
CENPAP49450 MTCO3P8-201ENST00000453691 755 ntBASIC2.35□□□□□ -2.03
CENPAP49450 AC132942.1-201ENST00000486753 483 ntBASIC2.35□□□□□ -2.03
CENPAP49450 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.35□□□□□ -2.03
CENPAP49450 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.35□□□□□ -2.03
CENPAP49450 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.35□□□□□ -2.03
CENPAP49450 MIR2355-201ENST00000517199 87 ntBASIC2.35□□□□□ -2.03
CENPAP49450 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CENPAP49450 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.35□□□□□ -2.03
CENPAP49450 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
CENPAP49450 SNORD53-201ENST00000579969 78 ntBASIC2.35□□□□□ -2.03
CENPAP49450 MIR4513-201ENST00000581077 86 ntBASIC2.35□□□□□ -2.03
CENPAP49450 Y_RNA.812-201ENST00000610788 101 ntBASIC2.35□□□□□ -2.03
CENPAP49450 Y_RNA.784-201ENST00000613803 101 ntBASIC2.35□□□□□ -2.03
CENPAP49450 TCL6_2.1-201ENST00000615162 119 ntBASIC2.35□□□□□ -2.03
CENPAP49450 Y_RNA.787-201ENST00000616522 101 ntBASIC2.35□□□□□ -2.03
CENPAP49450 Y_RNA.780-201ENST00000617336 101 ntBASIC2.35□□□□□ -2.03
CENPAP49450 Y_RNA.801-201ENST00000619005 101 ntBASIC2.35□□□□□ -2.03
CENPAP49450 AC138305.3-201ENST00000624988 240 ntBASIC2.35□□□□□ -2.03
CENPAP49450 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.35□□□□□ -2.03
CENPAP49450 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
CENPAP49450 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CENPAP49450 AC091812.1-201ENST00000432235 1948 ntBASIC2.34□□□□□ -2.03
CENPAP49450 Y_RNA.326-201ENST00000365176 113 ntBASIC2.34□□□□□ -2.03
CENPAP49450 SNORA33.2-201ENST00000365413 134 ntBASIC2.34□□□□□ -2.03
CENPAP49450 RNU6-245P-201ENST00000384020 107 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms