Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.15□□□□□ -1.91
CNGA1P29973 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CNGA1P29973 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CNGA1P29973 MRPL42P3-201ENST00000401492 326 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AC004866.1-201ENST00000411748 78 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.14□□□□□ -1.91
CNGA1P29973 AL160004.2-201ENST00000432935 350 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.14□□□□□ -1.91
CNGA1P29973 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.14□□□□□ -1.91
CNGA1P29973 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.14□□□□□ -1.91
CNGA1P29973 MTCO3P8-201ENST00000453691 755 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 SNORA25.14-201ENST00000516481 132 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AC022868.1-201ENST00000517767 391 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.14□□□□□ -1.91
CNGA1P29973 AP002770.2-201ENST00000543613 532 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AL442163.3-201ENST00000554110 156 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.14□□□□□ -1.91
CNGA1P29973 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AC005296.1-201ENST00000616145 209 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 AC135776.4-201ENST00000624300 1904 ntBASIC3.14□□□□□ -1.91
CNGA1P29973 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.13□□□□□ -1.91
CNGA1P29973 ZNF72P-201ENST00000425869 1908 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 RNU6-1301P-201ENST00000362724 104 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 RNU5F-3P-201ENST00000363767 117 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 Y_RNA.485-201ENST00000384395 102 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 MIR561-201ENST00000385216 97 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AL590004.1-201ENST00000405321 300 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 RNU2-48P-201ENST00000410694 191 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AC018868.1-201ENST00000491307 315 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AC096725.1-201ENST00000514266 313 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 MIR449C-201ENST00000516047 92 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AC093023.1-201ENST00000547375 507 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 SNORD53-201ENST00000579969 78 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
CNGA1P29973 AC090115.4-201ENST00000609970 188 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.13□□□□□ -1.91
CNGA1P29973 AC040896.1-201ENST00000613819 479 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AL132822.1-201ENST00000617063 513 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
CNGA1P29973 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNGA1P29973 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
CNGA1P29973 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CNGA1P29973 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.12□□□□□ -1.91
CNGA1P29973 RNU6-234P-201ENST00000365229 104 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNY3P4-201ENST00000384428 101 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU6-1072P-201ENST00000384703 107 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU6-443P-201ENST00000384780 107 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 SNORD88.1-201ENST00000408684 91 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNA5SP21-201ENST00000410917 96 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.12□□□□□ -1.91
CNGA1P29973 AC004386.2-201ENST00000441858 148 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.12□□□□□ -1.91
CNGA1P29973 AC009237.7-201ENST00000447357 229 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU7-26P-201ENST00000458980 63 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU1-41P-201ENST00000516161 162 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU1-48P-201ENST00000516400 162 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU6-965P-201ENST00000516721 96 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU6-1098P-201ENST00000516772 96 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 RNU2-44P-201ENST00000516795 194 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.12□□□□□ -1.91
CNGA1P29973 MIR7843-201ENST00000622274 79 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 AC064859.1-201ENST00000624741 174 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 AC091812.1-201ENST00000432235 1948 ntBASIC3.12□□□□□ -1.91
CNGA1P29973 MTND4P1-201ENST00000457501 1466 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNGA1P29973 U8.2-201ENST00000363156 134 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 Y_RNA.158-201ENST00000363651 101 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 RNU6-318P-201ENST00000384283 103 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 MIR512-1-201ENST00000384913 84 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 Y_RNA.645-201ENST00000391229 102 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 RNU6-1001P-201ENST00000411265 100 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 MTCO3P19-201ENST00000415864 321 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.11□□□□□ -1.91
CNGA1P29973 RPS29P6-201ENST00000438196 145 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 AP004217.1-201ENST00000480579 346 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 RPPH1-2P-201ENST00000516688 293 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 HSBP1P1-201ENST00000555205 166 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 MIR5006-201ENST00000583027 110 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 AC010999.1-201ENST00000611856 324 ntBASIC3.11□□□□□ -1.91
CNGA1P29973 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CNGA1P29973 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNGA1P29973 Y_RNA.27-201ENST00000362540 103 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 RNU1-62P-201ENST00000362599 164 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 RNA5SP361-201ENST00000362686 118 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 RNU6-879P-201ENST00000364328 108 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 Y_RNA.422-201ENST00000384054 114 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 RNU6-639P-201ENST00000384074 107 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 MIR329-1-201ENST00000385028 80 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.1□□□□□ -1.91
CNGA1P29973 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.1□□□□□ -1.91
CNGA1P29973 AC093852.1-201ENST00000503587 266 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.1□□□□□ -1.91
CNGA1P29973 RNA5SP24-201ENST00000516478 95 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 RNU6-344P-201ENST00000516635 111 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.1□□□□□ -1.91
CNGA1P29973 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.1□□□□□ -1.91
CNGA1P29973 MIR1248-201ENST00000629190 106 ntBASIC3.1□□□□□ -1.91
CNGA1P29973 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNGA1P29973 AC092593.1-201ENST00000515413 1815 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms