Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.45□□□□□ -2.18
P04436 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.45□□□□□ -2.18
P04436 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.45□□□□□ -2.18
P04436 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.45□□□□□ -2.18
P04436 FGF7P1-201ENST00000582820 288 ntBASIC1.45□□□□□ -2.18
P04436 RPL17P51-201ENST00000605218 238 ntBASIC1.45□□□□□ -2.18
P04436 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
P04436 AC090517.2-201ENST00000614966 680 ntBASIC1.45□□□□□ -2.18
P04436 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.45□□□□□ -2.18
P04436 AL136221.1-201ENST00000621449 509 ntBASIC1.45□□□□□ -2.18
P04436 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.45□□□□□ -2.18
P04436 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.45□□□□□ -2.18
P04436 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
P04436 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
P04436 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
P04436 Y_RNA.89-201ENST00000363031 102 ntBASIC1.44□□□□□ -2.18
P04436 RNU4-42P-201ENST00000364738 142 ntBASIC1.44□□□□□ -2.18
P04436 RNU6-338P-201ENST00000383888 105 ntBASIC1.44□□□□□ -2.18
P04436 MIR521-1-201ENST00000384902 87 ntBASIC1.44□□□□□ -2.18
P04436 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
P04436 RPS26P42-201ENST00000413485 326 ntBASIC1.44□□□□□ -2.18
P04436 Y_RNA.638-201ENST00000459374 113 ntBASIC1.44□□□□□ -2.18
P04436 AC010409.1-201ENST00000487382 476 ntBASIC1.44□□□□□ -2.18
P04436 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.44□□□□□ -2.18
P04436 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.44□□□□□ -2.18
P04436 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.44□□□□□ -2.18
P04436 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.44□□□□□ -2.18
P04436 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
P04436 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.44□□□□□ -2.18
P04436 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.44□□□□□ -2.18
P04436 AC146944.4-201ENST00000602697 718 ntBASIC1.44□□□□□ -2.18
P04436 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
P04436 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.44□□□□□ -2.18
P04436 MIR424-201ENST00000362227 98 ntBASIC1.43□□□□□ -2.18
P04436 Y_RNA.212-201ENST00000364177 102 ntBASIC1.43□□□□□ -2.18
P04436 RNU6-534P-201ENST00000364877 106 ntBASIC1.43□□□□□ -2.18
P04436 RNU6-128P-201ENST00000383976 107 ntBASIC1.43□□□□□ -2.18
P04436 U8.10-201ENST00000384260 133 ntBASIC1.43□□□□□ -2.18
P04436 SNORA17.3-201ENST00000391159 129 ntBASIC1.43□□□□□ -2.18
P04436 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.43□□□□□ -2.18
P04436 AC096745.1-201ENST00000509945 370 ntBASIC1.43□□□□□ -2.18
P04436 RNU5F-4P-201ENST00000516581 114 ntBASIC1.43□□□□□ -2.18
P04436 RNU6-256P-201ENST00000516747 97 ntBASIC1.43□□□□□ -2.18
P04436 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
P04436 SNORA59B-202ENST00000578183 701 ntBASIC1.43□□□□□ -2.18
P04436 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.43□□□□□ -2.18
P04436 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.43□□□□□ -2.18
P04436 MIR3942-201ENST00000585264 109 ntBASIC1.43□□□□□ -2.18
P04436 BNIP3P10-201ENST00000605360 577 ntBASIC1.43□□□□□ -2.18
P04436 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.43□□□□□ -2.18
P04436 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
P04436 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
P04436 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.43□□□□□ -2.18
P04436 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
P04436 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
P04436 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
P04436 MIR126-201ENST00000362291 85 ntBASIC1.42□□□□□ -2.18
P04436 Y_RNA.9-201ENST00000362354 101 ntBASIC1.42□□□□□ -2.18
P04436 RNU6-545P-201ENST00000362681 104 ntBASIC1.42□□□□□ -2.18
P04436 RNU6-112P-201ENST00000363599 104 ntBASIC1.42□□□□□ -2.18
P04436 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
P04436 Y_RNA.414-201ENST00000384011 101 ntBASIC1.42□□□□□ -2.18
P04436 RNU6-968P-201ENST00000384076 107 ntBASIC1.42□□□□□ -2.18
P04436 Y_RNA.530-201ENST00000384587 101 ntBASIC1.42□□□□□ -2.18
P04436 MIR548F1-201ENST00000408667 84 ntBASIC1.42□□□□□ -2.18
P04436 RNA5SP494-201ENST00000410653 129 ntBASIC1.42□□□□□ -2.18
P04436 AC099677.2-201ENST00000436385 175 ntBASIC1.42□□□□□ -2.18
P04436 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.42□□□□□ -2.18
P04436 RPL23AP75-201ENST00000491601 451 ntBASIC1.42□□□□□ -2.18
P04436 AC091435.1-201ENST00000505442 584 ntBASIC1.42□□□□□ -2.18
P04436 Y_RNA.655-201ENST00000515919 96 ntBASIC1.42□□□□□ -2.18
P04436 MTND1P5-201ENST00000517906 940 ntBASIC1.42□□□□□ -2.18
P04436 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.42□□□□□ -2.18
P04436 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.42□□□□□ -2.18
P04436 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.42□□□□□ -2.18
P04436 AC010928.2-201ENST00000588017 287 ntBASIC1.42□□□□□ -2.18
P04436 AC012557.2-201ENST00000605919 418 ntBASIC1.42□□□□□ -2.18
P04436 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.42□□□□□ -2.18
P04436 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.42□□□□□ -2.18
P04436 RNU6-562P-201ENST00000362731 107 ntBASIC1.41□□□□□ -2.18
P04436 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
P04436 RNU6-438P-201ENST00000365561 103 ntBASIC1.41□□□□□ -2.18
P04436 RNU6-831P-201ENST00000384548 107 ntBASIC1.41□□□□□ -2.18
P04436 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
P04436 ZNF885P-201ENST00000420174 1098 ntBASIC1.41□□□□□ -2.18
P04436 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.41□□□□□ -2.18
P04436 AC007215.1-201ENST00000464893 276 ntBASIC1.41□□□□□ -2.18
P04436 AC087477.1-201ENST00000465747 340 ntBASIC1.41□□□□□ -2.18
P04436 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
P04436 RPS23P5-201ENST00000495419 428 ntBASIC1.41□□□□□ -2.18
P04436 AC114801.2-201ENST00000503825 781 ntBASIC1.41□□□□□ -2.18
P04436 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
P04436 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.41□□□□□ -2.18
P04436 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
P04436 AC023043.2-201ENST00000589678 1026 ntBASIC1.41□□□□□ -2.18
P04436 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.41□□□□□ -2.18
P04436 AL512598.1-201ENST00000610158 273 ntBASIC1.41□□□□□ -2.18
P04436 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.41□□□□□ -2.18
P04436 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.41□□□□□ -2.18
P04436 MIR3688-2-201ENST00000636963 87 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms