Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
PTCD1O75127 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTCD1O75127 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PTCD1O75127 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD1O75127 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD1O75127 RNU1-62P-201ENST00000362599 164 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 RNU4-11P-201ENST00000365287 132 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCD1O75127 RNU1-89P-201ENST00000384592 164 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 MIR1289-1-201ENST00000408836 144 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 RN7SL863P-201ENST00000462370 296 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 AL033523.1-201ENST00000605153 153 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 AL138880.2-201ENST00000616214 239 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 AC022149.2-201ENST00000621061 203 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 MIR3674-201ENST00000636576 68 ntBASIC4.25□□□□□ -1.73
PTCD1O75127 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD1O75127 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD1O75127 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCD1O75127 MAPK10-373ENST00000641983 6772 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCD1O75127 AC002546.1-201ENST00000588041 2504 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PTCD1O75127 RNU6-1010P-201ENST00000362757 107 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 Y_RNA.525-201ENST00000384570 113 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCD1O75127 AL357552.1-201ENST00000445254 415 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 TGIF1P1-201ENST00000558095 802 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 AC006111.3-201ENST00000622137 383 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 AC018692.3-201ENST00000623929 123 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCD1O75127 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCD1O75127 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.24□□□□□ -1.73
PTCD1O75127 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCD1O75127 AL513302.2-201ENST00000562313 1842 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCD1O75127 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PTCD1O75127 RNU1-70P-201ENST00000362618 164 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 Y_RNA.357-201ENST00000365487 109 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 Y_RNA.415-201ENST00000384012 112 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 Y_RNA.542-201ENST00000384641 111 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 RNU6-750P-201ENST00000390946 107 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 RNA5SP252-201ENST00000391131 119 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 AC027124.2-201ENST00000428249 105 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 AC025750.2-201ENST00000442609 450 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 CYCTP-201ENST00000504253 315 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 RNU6-191P-201ENST00000516295 94 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 RNU7-121P-201ENST00000516604 62 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCD1O75127 DEFB117-201ENST00000602356 141 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCD1O75127 RNVU1-4-201ENST00000612985 164 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 PCGEM1.1-201ENST00000613431 131 ntBASIC4.23□□□□□ -1.73
PTCD1O75127 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCD1O75127 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCD1O75127 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCD1O75127 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCD1O75127 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTCD1O75127 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTCD1O75127 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCD1O75127 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PTCD1O75127 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCD1O75127 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTCD1O75127 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTCD1O75127 SNORA44-201ENST00000384584 132 ntBASIC4.22□□□□□ -1.73
PTCD1O75127 AC096649.2-201ENST00000416186 393 ntBASIC4.22□□□□□ -1.73
PTCD1O75127 AC112771.1-201ENST00000463581 102 ntBASIC4.22□□□□□ -1.73
PTCD1O75127 AC005840.1-201ENST00000498412 377 ntBASIC4.22□□□□□ -1.73
PTCD1O75127 SNORA70.19-201ENST00000516717 90 ntBASIC4.22□□□□□ -1.73
PTCD1O75127 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCD1O75127 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCD1O75127 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTCD1O75127 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTCD1O75127 AC068700.1-201ENST00000565862 3754 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RNU6-80P-201ENST00000384195 107 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RNU6-239P-201ENST00000390990 99 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RNU2-54P-201ENST00000410299 190 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RNA5SP201-201ENST00000410316 124 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RNU6-1199P-201ENST00000411249 104 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 EBAG9P1-201ENST00000418955 543 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.21□□□□□ -1.74
PTCD1O75127 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCD1O75127 AC016925.1-201ENST00000458303 298 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 AC145146.1-201ENST00000496370 254 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCD1O75127 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCD1O75127 AC027176.1-201ENST00000560204 514 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCD1O75127 MIR3613-201ENST00000579844 87 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 AC006380.1-201ENST00000603598 186 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 AL137790.1-201ENST00000634283 177 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 AF127577.6-201ENST00000623352 2191 ntBASIC4.21□□□□□ -1.74
PTCD1O75127 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCD1O75127 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCD1O75127 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
PTCD1O75127 RNU4-15P-201ENST00000362613 141 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms