Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.58□□□□□ -2.32
SCN2BO60939 MIR5006-201ENST00000583027 110 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 AL133173.2-201ENST00000614270 90 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN2BO60939 AC022418.1-201ENST00000624118 445 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 AC006927.3-201ENST00000638789 384 ntBASIC0.58□□□□□ -2.32
SCN2BO60939 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
SCN2BO60939 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SCN2BO60939 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SCN2BO60939 RNU4-76P-201ENST00000364509 141 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 RNU4-12P-201ENST00000365233 139 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 RNU6-1106P-201ENST00000390845 107 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AL034345.1-201ENST00000407768 123 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 MTCO2P8-201ENST00000412213 658 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN2BO60939 AL512286.1-201ENST00000439244 400 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 MTCO3P18-201ENST00000440206 761 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN2BO60939 USP9YP12-201ENST00000450481 570 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 SNRPFP3-201ENST00000457792 225 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 COX6CP6-201ENST00000490840 228 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 RNA5SP255-201ENST00000516370 107 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 MRPS36P3-201ENST00000519284 130 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN2BO60939 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN2BO60939 MIR3941-201ENST00000582572 103 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AC016727.2-201ENST00000603988 621 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN2BO60939 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 AC106754.2-201ENST00000623006 233 ntBASIC0.57□□□□□ -2.32
SCN2BO60939 RNU6-434P-201ENST00000384376 107 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 RNU6-393P-201ENST00000384475 107 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 MIR1-2-201ENST00000384961 85 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 MIR620-201ENST00000385232 95 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 SNORA12.1-201ENST00000390873 148 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 RNA5SP467-201ENST00000391274 118 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AF228730.1-201ENST00000397972 663 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AC004866.1-201ENST00000411748 78 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AL593851.1-201ENST00000426171 157 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN2BO60939 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN2BO60939 AC079781.2-201ENST00000446424 169 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 NFU1P2-201ENST00000448700 469 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 snoU13.6-201ENST00000458785 104 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 RNU6-410P-201ENST00000517006 107 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AC069113.1-201ENST00000517763 267 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AC022878.1-201ENST00000530684 149 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN2BO60939 MIR5695-201ENST00000579717 85 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 MIR5583-1-201ENST00000580941 59 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 MTATP6P3-201ENST00000581686 676 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 RSL24D1P11-201ENST00000591045 491 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AL162424.1-201ENST00000602325 221 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AC112191.3-201ENST00000604371 277 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AC002044.1-201ENST00000606707 158 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 TCL6_2.1-201ENST00000615162 119 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 uc_338.11-201ENST00000619132 160 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 AP002371.2-201ENST00000624450 503 ntBASIC0.56□□□□□ -2.32
SCN2BO60939 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN2BO60939 RNU5E-5P-201ENST00000365379 116 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 RNU6-505P-201ENST00000384427 107 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 MIR605-201ENST00000385078 83 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 RNU4-46P-201ENST00000410818 138 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 AC004386.2-201ENST00000441858 148 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN2BO60939 RPS29P15-201ENST00000458329 171 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 Vault.3-201ENST00000516676 95 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 AL359075.3-201ENST00000613288 217 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.55□□□□□ -2.32
SCN2BO60939 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SCN2BO60939 RNU6-500P-201ENST00000362349 107 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 Y_RNA.224-201ENST00000364308 111 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 Y_RNA.287-201ENST00000364853 94 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 RNU6-74P-201ENST00000384235 107 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 MIR499A-201ENST00000384903 122 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 MIR487A-201ENST00000385009 80 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SCN2BO60939 SNORA16.2-201ENST00000390991 127 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AL354692.1-201ENST00000423044 315 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.54□□□□□ -2.32
SCN2BO60939 TIMM9P3-201ENST00000428659 274 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.54□□□□□ -2.32
SCN2BO60939 RNU7-182P-201ENST00000459009 62 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN2BO60939 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.54□□□□□ -2.32
SCN2BO60939 SNORA25.17-201ENST00000517184 124 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN2BO60939 AGGF1P4-201ENST00000568249 801 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.54□□□□□ -2.32
SCN2BO60939 AL390123.1-201ENST00000603216 237 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AL357312.1-201ENST00000603879 298 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AC012557.2-201ENST00000605919 418 ntBASIC0.54□□□□□ -2.32
SCN2BO60939 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.54□□□□□ -2.32
SCN2BO60939 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms