Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.71-201ENST00000362892 104 ntBASIC3.78□□□□□ -1.8
SOX1O00570 RNU6-199P-201ENST00000362954 107 ntBASIC3.78□□□□□ -1.8
SOX1O00570 RNU6-215P-201ENST00000365169 102 ntBASIC3.78□□□□□ -1.8
SOX1O00570 Y_RNA.341-201ENST00000365341 102 ntBASIC3.78□□□□□ -1.8
SOX1O00570 MIR513A2-201ENST00000385249 127 ntBASIC3.78□□□□□ -1.8
SOX1O00570 MIR526A2-201ENST00000390198 65 ntBASIC3.78□□□□□ -1.8
SOX1O00570 AL591034.1-201ENST00000407447 340 ntBASIC3.78□□□□□ -1.8
SOX1O00570 RNA5SP504-201ENST00000410676 117 ntBASIC3.78□□□□□ -1.8
SOX1O00570 AC003685.2-201ENST00000422795 395 ntBASIC3.78□□□□□ -1.8
SOX1O00570 RPS3P1-201ENST00000456781 192 ntBASIC3.78□□□□□ -1.8
SOX1O00570 TRBV12-1-201ENST00000479785 344 ntBASIC3.78□□□□□ -1.8
SOX1O00570 Y_RNA.676-201ENST00000516393 96 ntBASIC3.78□□□□□ -1.8
SOX1O00570 RNU1-117P-201ENST00000517041 158 ntBASIC3.78□□□□□ -1.8
SOX1O00570 AC025281.1-201ENST00000567026 265 ntBASIC3.78□□□□□ -1.8
SOX1O00570 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.78□□□□□ -1.8
SOX1O00570 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.78□□□□□ -1.8
SOX1O00570 AC008873.1-201ENST00000625051 138 ntBASIC3.78□□□□□ -1.8
SOX1O00570 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SOX1O00570 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX1O00570 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX1O00570 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX1O00570 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SOX1O00570 U3.8-201ENST00000363675 217 ntBASIC3.77□□□□□ -1.81
SOX1O00570 RNU6-1048P-201ENST00000364054 107 ntBASIC3.77□□□□□ -1.81
SOX1O00570 Y_RNA.310-201ENST00000365063 113 ntBASIC3.77□□□□□ -1.81
SOX1O00570 SNORA18.2-201ENST00000383865 132 ntBASIC3.77□□□□□ -1.81
SOX1O00570 RNU6-855P-201ENST00000410395 104 ntBASIC3.77□□□□□ -1.81
SOX1O00570 RPL23AP58-201ENST00000440453 469 ntBASIC3.77□□□□□ -1.81
SOX1O00570 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.77□□□□□ -1.81
SOX1O00570 HMGN2P16-201ENST00000456802 261 ntBASIC3.77□□□□□ -1.81
SOX1O00570 RN7SL585P-201ENST00000470538 280 ntBASIC3.77□□□□□ -1.81
SOX1O00570 AC145146.1-201ENST00000496370 254 ntBASIC3.77□□□□□ -1.81
SOX1O00570 SCARNA8-201ENST00000515924 131 ntBASIC3.77□□□□□ -1.81
SOX1O00570 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.77□□□□□ -1.81
SOX1O00570 AL591424.2-201ENST00000617023 128 ntBASIC3.77□□□□□ -1.81
SOX1O00570 U6.115-201ENST00000636045 103 ntBASIC3.77□□□□□ -1.81
SOX1O00570 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
SOX1O00570 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
SOX1O00570 AF117829.1-206ENST00000621883 3802 ntBASIC3.77□□□□□ -1.81
SOX1O00570 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.77□□□□□ -1.81
SOX1O00570 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX1O00570 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
SOX1O00570 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX1O00570 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SOX1O00570 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX1O00570 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
SOX1O00570 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX1O00570 Y_RNA.218-201ENST00000364218 104 ntBASIC3.76□□□□□ -1.81
SOX1O00570 Y_RNA.572-201ENST00000384757 98 ntBASIC3.76□□□□□ -1.81
SOX1O00570 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX1O00570 RNU6-1211P-201ENST00000459179 105 ntBASIC3.76□□□□□ -1.81
SOX1O00570 AC114982.1-201ENST00000469402 321 ntBASIC3.76□□□□□ -1.81
SOX1O00570 UBL5P3-201ENST00000475112 231 ntBASIC3.76□□□□□ -1.81
SOX1O00570 VWA8P1-201ENST00000510889 176 ntBASIC3.76□□□□□ -1.81
SOX1O00570 RNU6-1333P-201ENST00000516162 93 ntBASIC3.76□□□□□ -1.81
SOX1O00570 RNU6-1007P-201ENST00000516586 107 ntBASIC3.76□□□□□ -1.81
SOX1O00570 RNU6-453P-201ENST00000516819 85 ntBASIC3.76□□□□□ -1.81
SOX1O00570 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.76□□□□□ -1.81
SOX1O00570 MIR4435-1-201ENST00000582552 80 ntBASIC3.76□□□□□ -1.81
SOX1O00570 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.76□□□□□ -1.81
SOX1O00570 AL391813.1-201ENST00000603098 260 ntBASIC3.76□□□□□ -1.81
SOX1O00570 AL391903.3-201ENST00000612158 163 ntBASIC3.76□□□□□ -1.81
SOX1O00570 MIR3658-201ENST00000636291 56 ntBASIC3.76□□□□□ -1.81
SOX1O00570 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX1O00570 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX1O00570 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX1O00570 AC010889.1-201ENST00000566193 2666 ntBASIC3.76□□□□□ -1.81
SOX1O00570 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX1O00570 Z83843.1-201ENST00000604070 3685 ntBASIC3.75□□□□□ -1.81
SOX1O00570 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SOX1O00570 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX1O00570 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX1O00570 RNU6-1205P-201ENST00000363625 106 ntBASIC3.75□□□□□ -1.81
SOX1O00570 SNORD116-14-201ENST00000383894 92 ntBASIC3.75□□□□□ -1.81
SOX1O00570 RNU6-969P-201ENST00000383900 105 ntBASIC3.75□□□□□ -1.81
SOX1O00570 SNORD116-17-201ENST00000383929 92 ntBASIC3.75□□□□□ -1.81
SOX1O00570 RNU6-144P-201ENST00000383951 107 ntBASIC3.75□□□□□ -1.81
SOX1O00570 SNORA67.2-201ENST00000384300 149 ntBASIC3.75□□□□□ -1.81
SOX1O00570 SNORD116-15-201ENST00000384445 92 ntBASIC3.75□□□□□ -1.81
SOX1O00570 SNORD116-19-201ENST00000384729 92 ntBASIC3.75□□□□□ -1.81
SOX1O00570 MIR147B-201ENST00000390185 80 ntBASIC3.75□□□□□ -1.81
SOX1O00570 HMGN2P20-201ENST00000437531 273 ntBASIC3.75□□□□□ -1.81
SOX1O00570 RNU7-23P-201ENST00000459465 62 ntBASIC3.75□□□□□ -1.81
SOX1O00570 RPL30P14-201ENST00000482744 348 ntBASIC3.75□□□□□ -1.81
SOX1O00570 SNORA70.12-201ENST00000516084 153 ntBASIC3.75□□□□□ -1.81
SOX1O00570 RNA5SP154-201ENST00000516193 111 ntBASIC3.75□□□□□ -1.81
SOX1O00570 MIR4425-201ENST00000580572 84 ntBASIC3.75□□□□□ -1.81
SOX1O00570 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX1O00570 TUG1_4.1-201ENST00000619464 181 ntBASIC3.75□□□□□ -1.81
SOX1O00570 MIR7111-201ENST00000619751 72 ntBASIC3.75□□□□□ -1.81
SOX1O00570 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX1O00570 AP001486.2-201ENST00000561652 5113 ntBASIC3.75□□□□□ -1.81
SOX1O00570 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.75□□□□□ -1.81
SOX1O00570 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOX1O00570 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX1O00570 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOX1O00570 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX1O00570 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOX1O00570 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOX1O00570 RNA5SP502-201ENST00000362694 119 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms