Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GPC6Q9Y625 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GPC6Q9Y625 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GPC6Q9Y625 SNORA3C-201ENST00000408792 125 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 AL353705.1-201ENST00000433468 480 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GPC6Q9Y625 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.88□□□□□ -1.79
GPC6Q9Y625 RNA5SP170-201ENST00000517150 101 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.88□□□□□ -1.79
GPC6Q9Y625 AC133485.4-201ENST00000561835 220 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 AC138907.4-201ENST00000570107 226 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 MIR5047-201ENST00000579212 100 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 MIR4753-201ENST00000585119 83 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 AC023043.3-201ENST00000593113 385 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 AC108081.1-201ENST00000604358 221 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.88□□□□□ -1.79
GPC6Q9Y625 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GPC6Q9Y625 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GPC6Q9Y625 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GPC6Q9Y625 Z82209.1-201ENST00000422141 2135 ntBASIC3.88□□□□□ -1.79
GPC6Q9Y625 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GPC6Q9Y625 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GPC6Q9Y625 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GPC6Q9Y625 RNU6-1298P-201ENST00000362456 101 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 U8.1-201ENST00000362843 134 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 SNORD6-201ENST00000365444 73 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 MIR181A2-201ENST00000384863 110 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 MIR1278-201ENST00000408753 81 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 RNA5SP38-201ENST00000410750 119 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 AC092017.2-201ENST00000427600 362 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 AC245047.4-201ENST00000433189 144 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 RN7SL93P-201ENST00000463035 293 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 RNA5SP519-201ENST00000516480 119 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 Y_RNA.712-201ENST00000517011 92 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 AL049861.1-201ENST00000603130 150 ntBASIC3.87□□□□□ -1.79
GPC6Q9Y625 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GPC6Q9Y625 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GPC6Q9Y625 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
GPC6Q9Y625 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GPC6Q9Y625 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
GPC6Q9Y625 SNORA27.1-201ENST00000362604 124 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RNU4-13P-201ENST00000364019 141 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RNA5SP366-201ENST00000365454 123 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 SNORA40.5-201ENST00000391061 128 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RNA5SP252-201ENST00000391131 119 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RNU6-57P-201ENST00000411348 103 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 HMGN2P31-201ENST00000432430 273 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RPL23AP46-201ENST00000438548 490 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 AC090515.1-201ENST00000465295 476 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RPS26P55-201ENST00000471178 356 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 RNA5SP49-201ENST00000516450 115 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 MIR3186-201ENST00000577404 85 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 RPL30P11-203ENST00000598995 310 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 AC005972.2-201ENST00000604690 348 ntBASIC3.86□□□□□ -1.79
GPC6Q9Y625 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
GPC6Q9Y625 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.86□□□□□ -1.79
GPC6Q9Y625 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GPC6Q9Y625 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.85□□□□□ -1.79
GPC6Q9Y625 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
GPC6Q9Y625 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GPC6Q9Y625 UBE3AP2-201ENST00000429033 2259 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 Y_RNA.43-201ENST00000362670 111 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 RNU6-271P-201ENST00000363858 105 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 RNU1-132P-201ENST00000364300 164 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 RNU6-597P-201ENST00000365620 102 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 Y_RNA.432-201ENST00000384087 111 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 RNU6-136P-201ENST00000384663 107 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 MIR1283-1-201ENST00000408494 87 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 AL135786.1-201ENST00000415892 214 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 AC016717.1-201ENST00000448918 286 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 AC109327.1-201ENST00000471666 403 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 SNORD33.1-201ENST00000516213 88 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 Y_RNA.692-201ENST00000516627 105 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.85□□□□□ -1.79
GPC6Q9Y625 TVP23BP1-201ENST00000557500 617 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 AC114781.5-201ENST00000615297 108 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 AC011944.2-201ENST00000624440 683 ntBASIC3.85□□□□□ -1.79
GPC6Q9Y625 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GPC6Q9Y625 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
GPC6Q9Y625 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.85□□□□□ -1.79
GPC6Q9Y625 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.84□□□□□ -1.79
GPC6Q9Y625 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.84□□□□□ -1.79
GPC6Q9Y625 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms