Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC092427.1-202ENST00000430569 476 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC016632.1-201ENST00000503994 196 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 SNORA31.23-201ENST00000517219 133 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AL391261.3-201ENST00000557194 520 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC010900.2-201ENST00000604508 210 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CTDP1Q9Y5B0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 SNORD113-8-201ENST00000363497 74 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.352-201ENST00000365439 102 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-338P-201ENST00000383888 105 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-209P-201ENST00000384118 107 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.581-201ENST00000391017 97 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 AL512633.1-201ENST00000399931 655 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-138P-201ENST00000515952 107 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-1338P-201ENST00000516328 91 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.33□□□□□ -1.88
CTDP1Q9Y5B0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.16-201ENST00000362421 102 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-200P-201ENST00000364743 107 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.319-201ENST00000365138 92 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-318P-201ENST00000384283 103 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RNU4-70P-201ENST00000384579 139 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RPL19P1-201ENST00000411635 428 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 AL590135.1-201ENST00000422215 156 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 AC009414.1-201ENST00000427200 443 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 MTND5P15-201ENST00000434246 349 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 AL139109.1-201ENST00000455491 297 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RPS23P5-201ENST00000495419 428 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 AC006199.1-201ENST00000548728 219 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 MIR5571-201ENST00000577998 113 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 AC005296.1-201ENST00000616145 209 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 AL450472.1-202ENST00000637286 180 ntBASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.32□□□□□ -1.88
CTDP1Q9Y5B0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 SNORA68.1-201ENST00000364537 132 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.539-201ENST00000384635 107 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.541-201ENST00000384640 113 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 AL603910.2-201ENST00000407268 136 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MIR548I3-201ENST00000408378 149 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MIR548I1-201ENST00000408810 149 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 RN7SKP61-201ENST00000410642 295 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 AC244505.4-201ENST00000434905 287 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 SSXP5-201ENST00000443473 287 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 SCARNA24.2-201ENST00000516968 130 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 ACA59.2-201ENST00000517061 156 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 CKS1BP7-201ENST00000522230 235 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 AC027288.2-201ENST00000553028 243 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MIR5695-201ENST00000579717 85 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 AC103810.1-201ENST00000579873 453 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 MIR3616-201ENST00000584070 92 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 HMGN2P15-201ENST00000585707 270 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 AL138963.2-201ENST00000605137 226 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 AC135776.4-201ENST00000624300 1904 ntBASIC3.31□□□□□ -1.88
CTDP1Q9Y5B0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 HAUS6P2-201ENST00000433254 2404 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 RNA5SP361-201ENST00000362686 118 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.65-201ENST00000362846 100 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 SNORA36A-201ENST00000384221 132 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 U8.10-201ENST00000384260 133 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 MIR196B-201ENST00000384852 84 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 SNORD12B-201ENST00000410433 91 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 WARS2P1-201ENST00000429678 537 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 AC244670.1-201ENST00000436879 112 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 AC096638.1-201ENST00000444678 216 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 RPL39P29-201ENST00000447779 157 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 RN7SL499P-201ENST00000481141 276 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 AP001025.1-201ENST00000486139 332 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 AL359198.2-201ENST00000611836 194 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 AL136360.1-201ENST00000503377 1900 ntBASIC3.3□□□□□ -1.88
CTDP1Q9Y5B0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms