Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MIR1185-2-201ENST00000408687 86 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 RN7SKP156-201ENST00000410308 342 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 CYCSP35-201ENST00000451978 304 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 Y_RNA.641-201ENST00000459414 105 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 Y_RNA.679-201ENST00000516416 91 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 SNORA48.11-201ENST00000517015 89 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 AC022616.8-201ENST00000533569 253 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 MIR3616-201ENST00000584070 92 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 AL356280.1-201ENST00000603614 379 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 AC068647.1-201ENST00000489539 2265 ntBASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.56□□□□□ -1.84
VTI1BQ9UEU0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 RNU6-662P-201ENST00000384253 104 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 RNU6-220P-201ENST00000390919 107 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AL031003.1-201ENST00000404229 172 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AL139095.1-201ENST00000404326 391 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 U3.39-201ENST00000408569 239 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 RNU6-651P-201ENST00000411040 105 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 RNU2-32P-201ENST00000411193 191 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AL139281.1-201ENST00000422120 335 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AC024067.1-201ENST00000426199 223 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 SNORD2.1-201ENST00000458762 69 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 COX6CP14-201ENST00000469580 174 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 RNU6-965P-201ENST00000516721 96 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 SNORA81.3-201ENST00000517283 198 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VTI1BQ9UEU0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 Y_RNA.29-201ENST00000362570 113 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 Y_RNA.199-201ENST00000364014 102 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 RN7SKP202-201ENST00000410439 330 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 RNU2-63P-201ENST00000410792 194 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC016925.1-201ENST00000458303 298 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC010401.1-201ENST00000463867 348 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 SNORD116-28-201ENST00000516123 91 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 RNU6-182P-201ENST00000516970 105 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 MIR5187-201ENST00000583479 76 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC005828.6-201ENST00000606610 232 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 AC098479.1-201ENST00000609225 154 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 MIR1248-201ENST00000629190 106 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 U6.115-201ENST00000636045 103 ntBASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTI1BQ9UEU0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 RNU1-23P-201ENST00000363361 144 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 Y_RNA.292-201ENST00000364904 97 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 RNY4P28-201ENST00000365281 93 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 Y_RNA.361-201ENST00000365515 120 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 SUMO1P2-201ENST00000452524 304 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 RNU7-57P-201ENST00000459540 60 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 AC006483.1-201ENST00000487308 313 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 MIR3684-201ENST00000579779 74 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 AC022149.2-201ENST00000621061 203 ntBASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VTI1BQ9UEU0 AC138915.1-201ENST00000565427 1685 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 MIR411-201ENST00000362239 96 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 RNU6-975P-201ENST00000384296 105 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 MIR548I3-201ENST00000408378 149 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 MIR548I1-201ENST00000408810 149 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 Y_RNA.626-201ENST00000411288 95 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 CYCSP19-201ENST00000411715 316 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 AL513477.1-202ENST00000417061 214 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.52□□□□□ -1.85
VTI1BQ9UEU0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms