Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNU6-454P-201ENST00000364292 107 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 SNORD113-1-201ENST00000365321 69 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 Y_RNA.441-201ENST00000384123 112 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 Y_RNA.571-201ENST00000384753 98 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 U3.39-201ENST00000408569 239 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 RN7SKP111-201ENST00000410349 271 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 RHEBP3-201ENST00000411920 351 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 RPL31P41-201ENST00000477967 372 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 AC145146.1-201ENST00000496370 254 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 RNU6-344P-201ENST00000516635 111 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 MIR5006-201ENST00000583027 110 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 AL391813.1-201ENST00000603098 260 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 AC108706.1-201ENST00000611053 297 ntBASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 MIR422A-201ENST00000362286 90 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 SNORD87-201ENST00000364849 89 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 Y_RNA.291-201ENST00000364886 113 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 MIR186-201ENST00000384988 86 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 AL451074.5-201ENST00000415894 435 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 HMGN2P20-201ENST00000437531 273 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 Y_RNA.637-201ENST00000459424 114 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 AC009127.3-201ENST00000570531 403 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 AL133393.1-201ENST00000603277 287 ntBASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM39AQ9NV64 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 RNU6-655P-201ENST00000362858 107 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 SNORD50.2-201ENST00000365465 70 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 SNORA18.2-201ENST00000383865 132 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 RNA5SP252-201ENST00000391131 119 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AL357075.1-201ENST00000404107 726 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 RPS3P1-201ENST00000456781 192 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AC112771.1-201ENST00000463581 102 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 RNU1-117P-201ENST00000517041 158 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 DEFB131C-201ENST00000528817 165 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 AC068205.3-201ENST00000636385 468 ntBASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM39AQ9NV64 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
TMEM39AQ9NV64 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 Y_RNA.7-201ENST00000362352 102 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RNU6-1210P-201ENST00000363775 107 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 Z98941.1-201ENST00000407764 100 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RNU4-47P-201ENST00000410876 114 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RNU5E-9P-201ENST00000411164 104 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 AC091179.1-201ENST00000461606 579 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RN7SL429P-201ENST00000479090 223 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RN7SL489P-201ENST00000486185 223 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RN7SL327P-201ENST00000488659 223 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RNU2-44P-201ENST00000516795 194 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RNU6-579P-201ENST00000516879 102 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RN7SKP209-201ENST00000516888 304 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 SUMO2P18-201ENST00000518873 252 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 AC025281.1-201ENST00000567026 265 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 AP001485.1-201ENST00000604799 199 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 RN7SL853P-201ENST00000617250 223 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 AC006111.3-201ENST00000622137 383 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
TMEM39AQ9NV64 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 RNU1-57P-201ENST00000384491 166 ntBASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 RNU6-763P-201ENST00000390865 106 ntBASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 RNU2-2P-201ENST00000410396 191 ntBASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 AC025750.2-201ENST00000442609 450 ntBASIC3.76□□□□□ -1.81
TMEM39AQ9NV64 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms