Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 ARL5AP4-201ENST00000430731 512 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 FCF1P4-201ENST00000448326 183 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 EEF1B2P7-201ENST00000451177 676 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 U8.20-201ENST00000459445 131 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VTA1Q9NP79 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VTA1Q9NP79 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
VTA1Q9NP79 AC080128.1-201ENST00000474389 1917 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 RNU6-222P-201ENST00000362438 107 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 SNORA46.1-201ENST00000391069 153 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 RNU6-1328P-201ENST00000410938 106 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 WARS2P1-201ENST00000429678 537 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 MTND3P2-201ENST00000438452 342 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 AC007395.1-201ENST00000451333 677 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.13□□□□□ -1.91
VTA1Q9NP79 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.13□□□□□ -1.91
VTA1Q9NP79 MIR3199-1-201ENST00000582434 88 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.13□□□□□ -1.91
VTA1Q9NP79 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.13□□□□□ -1.91
VTA1Q9NP79 TCL6_2.1-201ENST00000615162 119 ntBASIC3.13□□□□□ -1.91
VTA1Q9NP79 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.13□□□□□ -1.91
VTA1Q9NP79 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VTA1Q9NP79 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VTA1Q9NP79 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VTA1Q9NP79 AC093831.2-201ENST00000624393 3427 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 snoU2_19.1-201ENST00000362361 80 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 RNU1-35P-201ENST00000362782 153 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 RNU6-879P-201ENST00000364328 108 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 RNU6-611P-201ENST00000384276 104 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 RNU6-1105P-201ENST00000384774 107 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 MRPL35P1-201ENST00000404272 572 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 MIR548F4-201ENST00000408515 105 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 BMS1P22-201ENST00000414726 313 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 AC104332.2-201ENST00000429959 156 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.12□□□□□ -1.91
VTA1Q9NP79 RPL21P2-201ENST00000440049 481 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
VTA1Q9NP79 AC140059.1-201ENST00000489238 361 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 RNU6-586P-201ENST00000517265 104 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 AC018630.3-201ENST00000542637 96 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 Y_RNA.772-201ENST00000606692 102 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 AC013412.1-201ENST00000610687 192 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 AC010999.1-201ENST00000611856 324 ntBASIC3.12□□□□□ -1.91
VTA1Q9NP79 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VTA1Q9NP79 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.12□□□□□ -1.91
VTA1Q9NP79 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VTA1Q9NP79 ZNF204P-201ENST00000416749 2397 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 Y_RNA.133-201ENST00000363428 110 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 Y_RNA.149-201ENST00000363558 117 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 Y_RNA.176-201ENST00000363815 109 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 RNU6-1145P-201ENST00000384246 107 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 AL513477.1-202ENST00000417061 214 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 DPH3P2-201ENST00000422618 250 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.11□□□□□ -1.91
VTA1Q9NP79 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.11□□□□□ -1.91
VTA1Q9NP79 SNORA25.14-201ENST00000516481 132 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 RNU6-1012P-201ENST00000516606 109 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
VTA1Q9NP79 AC093023.1-201ENST00000547375 507 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 MIR5695-201ENST00000579717 85 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 MIR4435-1-201ENST00000582552 80 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 AC005562.2-201ENST00000618264 111 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 AC092593.1-201ENST00000515413 1815 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 ZNF72P-201ENST00000425869 1908 ntBASIC3.11□□□□□ -1.91
VTA1Q9NP79 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
VTA1Q9NP79 Y_RNA.153-201ENST00000363615 91 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 RNU6-873P-201ENST00000363833 107 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 Y_RNA.179-201ENST00000363844 90 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 SNORD32B-201ENST00000364460 84 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 MIR95-201ENST00000385072 81 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 MIR1302-3-201ENST00000408128 138 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 RNU2-63P-201ENST00000410792 194 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 U8.22-201ENST00000459141 133 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 AC074133.1-201ENST00000515696 183 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 Y_RNA.683-201ENST00000516508 93 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 RNU6-344P-201ENST00000516635 111 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.1□□□□□ -1.91
VTA1Q9NP79 MIR3945-201ENST00000581853 98 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 AL713866.2-201ENST00000603579 219 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 AC090115.4-201ENST00000609970 188 ntBASIC3.1□□□□□ -1.91
VTA1Q9NP79 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VTA1Q9NP79 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 464.7 ms