Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR1294-201ENST00000408503 142 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AL161788.1-201ENST00000441805 169 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AC125232.2-201ENST00000592457 143 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AC136443.5-201ENST00000603741 370 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AC010999.1-201ENST00000611856 324 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 TCL6_2.1-201ENST00000615162 119 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM54Q9BYV2 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 Y_RNA.152-201ENST00000363578 100 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 SNORD32B-201ENST00000364460 84 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 AL445687.1-201ENST00000439946 251 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 SNORA9.3-201ENST00000516383 129 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 Y_RNA.715-201ENST00000517082 110 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 AC022080.3-201ENST00000544433 482 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
TRIM54Q9BYV2 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 SNORA18.2-201ENST00000383865 132 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 RNU6-708P-201ENST00000384217 107 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 Y_RNA.551-201ENST00000384661 102 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 MIR1252-201ENST00000408861 65 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 DPH3P2-201ENST00000422618 250 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 SDAD1P3-201ENST00000427380 333 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AC092427.1-202ENST00000430569 476 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AC004386.2-201ENST00000441858 148 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AC091826.1-201ENST00000514065 313 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 RN7SKP49-201ENST00000516675 260 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 MIR5006-201ENST00000583027 110 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 MIR4325-201ENST00000583049 90 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AL355297.3-201ENST00000604082 446 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 AL121655.1-201ENST00000605811 308 ntBASIC2.78□□□□□ -1.96
TRIM54Q9BYV2 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RNU1-62P-201ENST00000362599 164 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RNA5SP361-201ENST00000362686 118 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RNU6-944P-201ENST00000364023 107 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RNU6-26P-201ENST00000383985 107 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RNU6-793P-201ENST00000384233 104 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.471-201ENST00000384312 102 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 FCF1P4-201ENST00000448326 183 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.683-201ENST00000516508 93 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 AC034114.1-201ENST00000520293 285 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 AC090616.3-201ENST00000582184 217 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 ZNF861P-201ENST00000588126 639 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 AL162730.1-201ENST00000605734 292 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 U6.92-201ENST00000636464 89 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM54Q9BYV2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 RNU6-318P-201ENST00000384283 103 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 AC010095.1-201ENST00000443543 144 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 RPS27AP9-201ENST00000477681 438 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 RNU5F-4P-201ENST00000516581 114 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 RNU2-44P-201ENST00000516795 194 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 Y_RNA.713-201ENST00000517013 96 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 SNORA48.11-201ENST00000517015 89 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 CYCSP23-201ENST00000519781 313 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 AC018630.3-201ENST00000542637 96 ntBASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM54Q9BYV2 AL078596.1-201ENST00000624856 447 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms