Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SNORA68.1-201ENST00000364537 132 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.270-201ENST00000364693 104 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.277-201ENST00000364754 102 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.338-201ENST00000365320 114 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.405-201ENST00000383979 100 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.439-201ENST00000384119 94 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.451-201ENST00000384200 100 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.504-201ENST00000384481 104 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.524-201ENST00000384564 100 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.561-201ENST00000384694 100 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 MRPL35P1-201ENST00000404272 572 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AIG1P1-201ENST00000503376 148 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 RNU4-71P-201ENST00000516258 113 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 IGKV3-31-201ENST00000523109 329 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AC093023.1-201ENST00000547375 507 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AC104581.2-201ENST00000572227 430 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AC103810.1-201ENST00000579873 453 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AC010620.2-201ENST00000600135 313 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 SNORA50A-202ENST00000629536 136 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 LINC02555-201ENST00000563933 1951 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.16-201ENST00000362421 102 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RNU6-655P-201ENST00000362858 107 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 SNORD81.1-201ENST00000363064 77 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.143-201ENST00000363520 106 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RNA5SP42-201ENST00000364278 115 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RNU4-9P-201ENST00000364951 139 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 AL139156.1-201ENST00000412785 841 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 AC104332.1-201ENST00000440471 797 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RPS4XP22-201ENST00000480755 780 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RPL30P1-201ENST00000488676 339 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RPS23P5-201ENST00000495419 428 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1338P-201ENST00000516328 91 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 BX284668.6-201ENST00000606899 438 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 AL359198.2-201ENST00000611836 194 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 MIR7515-201ENST00000637837 67 ntBASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRFN3Q9BTN0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1266P-201ENST00000362794 105 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RNU6-774P-201ENST00000363238 107 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RNU6-886P-201ENST00000384319 105 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RNY3P4-201ENST00000384428 101 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.508-201ENST00000384502 114 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.541-201ENST00000384640 113 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 SNORA67.4-201ENST00000384688 142 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 SNORA19-201ENST00000384737 128 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 MIR186-201ENST00000384988 86 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 SNORA26.3-201ENST00000391119 136 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 AL353705.4-201ENST00000449661 238 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 U8.22-201ENST00000459141 133 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 RNU7-87P-201ENST00000459343 62 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 MIR5571-201ENST00000577998 113 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 AC060766.3-201ENST00000591442 263 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN3Q9BTN0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.200-201ENST00000364018 102 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 RN7SKP192-201ENST00000411291 327 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 RPL23AP58-201ENST00000440453 469 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 AL138752.1-201ENST00000452964 351 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 RNU7-175P-201ENST00000515915 61 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 BRDTP1-201ENST00000605735 677 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 AC046143.2-201ENST00000609789 160 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 AC091903.1-201ENST00000624322 454 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms