Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USB1Q9BQ65 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
USB1Q9BQ65 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USB1Q9BQ65 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
USB1Q9BQ65 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USB1Q9BQ65 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USB1Q9BQ65 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USB1Q9BQ65 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.15□□□□□ -1.75
USB1Q9BQ65 AL672167.1-203ENST00000641299 2975 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 AL136164.3-201ENST00000624429 3978 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USB1Q9BQ65 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.14□□□□□ -1.75
USB1Q9BQ65 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USB1Q9BQ65 RNU6-944P-201ENST00000364023 107 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 SNORD113.2-201ENST00000364166 89 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 AL031121.1-201ENST00000406553 254 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 RNA5SP239-201ENST00000410218 129 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 MRPS17P9-201ENST00000511924 393 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 AC011406.1-201ENST00000512440 370 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.14□□□□□ -1.75
USB1Q9BQ65 MIR4284-201ENST00000578924 81 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.14□□□□□ -1.75
USB1Q9BQ65 MIR6748-201ENST00000610433 71 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 AL442128.1-201ENST00000615151 90 ntBASIC4.14□□□□□ -1.75
USB1Q9BQ65 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.14□□□□□ -1.75
USB1Q9BQ65 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USB1Q9BQ65 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USB1Q9BQ65 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.14□□□□□ -1.75
USB1Q9BQ65 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USB1Q9BQ65 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USB1Q9BQ65 Y_RNA.220-201ENST00000364244 109 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 RNU6-438P-201ENST00000365561 103 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 RNU6-1274P-201ENST00000384557 107 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 MIR181B1-201ENST00000385240 110 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 HSPE1P26-201ENST00000405341 275 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 AL513477.1-202ENST00000417061 214 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 CKS1BP6-201ENST00000424932 240 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 AC021205.2-201ENST00000480069 347 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 NDUFA4P2-201ENST00000489989 244 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 PARP4P3-201ENST00000510265 317 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.13□□□□□ -1.75
USB1Q9BQ65 AL022401.1-201ENST00000619498 108 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 MIR1245B-201ENST00000636115 69 ntBASIC4.13□□□□□ -1.75
USB1Q9BQ65 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.13□□□□□ -1.75
USB1Q9BQ65 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USB1Q9BQ65 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.13□□□□□ -1.75
USB1Q9BQ65 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USB1Q9BQ65 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USB1Q9BQ65 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USB1Q9BQ65 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USB1Q9BQ65 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USB1Q9BQ65 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USB1Q9BQ65 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USB1Q9BQ65 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.12□□□□□ -1.75
USB1Q9BQ65 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USB1Q9BQ65 RNY4P6-201ENST00000363667 96 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USB1Q9BQ65 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USB1Q9BQ65 RNA5SP38-201ENST00000410750 119 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 Y_RNA.621-201ENST00000411065 96 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.12□□□□□ -1.75
USB1Q9BQ65 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
USB1Q9BQ65 AC015795.1-201ENST00000513669 327 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 RNU6-109P-201ENST00000516364 107 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 RNU6-184P-201ENST00000516514 107 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 MIR5096-201ENST00000583713 70 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 MIR4765-201ENST00000585007 77 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 VN1R85P-201ENST00000601587 426 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 uc_338.32-201ENST00000615087 172 ntBASIC4.12□□□□□ -1.75
USB1Q9BQ65 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.12□□□□□ -1.75
USB1Q9BQ65 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.12□□□□□ -1.75
USB1Q9BQ65 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
USB1Q9BQ65 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USB1Q9BQ65 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USB1Q9BQ65 RNU6-888P-201ENST00000363010 101 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 Y_RNA.198-201ENST00000364013 98 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 SNORD24-201ENST00000383884 75 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 RNY1P7-201ENST00000384743 110 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 MIR590-201ENST00000385008 97 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 AL117342.1-201ENST00000404861 406 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 AL645608.4-201ENST00000423619 154 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 RPS29P33-201ENST00000456717 146 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 snoU13.1-201ENST00000459157 104 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 RNU2-34P-201ENST00000516534 121 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 SCARNA15-202ENST00000516881 127 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 RNU6-1096P-201ENST00000517089 102 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 SNORA31.21-201ENST00000517180 77 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 AC069240.1-201ENST00000548774 375 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 AP005019.3-201ENST00000620418 560 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 AP000346.3-201ENST00000622821 210 ntBASIC4.11□□□□□ -1.75
USB1Q9BQ65 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USB1Q9BQ65 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms