Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-997P-201ENST00000384725 107 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 MIR193B-201ENST00000384907 83 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 MIR29C-201ENST00000385231 88 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 RNA5SP465-201ENST00000391195 109 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.39□□□□□ -2.19
CDX2Q99626 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.39□□□□□ -2.19
CDX2Q99626 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.39□□□□□ -2.19
CDX2Q99626 FGF7P6-202ENST00000451282 293 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.39□□□□□ -2.19
CDX2Q99626 GMFBP1-201ENST00000467831 427 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 RPL30P12-201ENST00000474666 353 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.39□□□□□ -2.19
CDX2Q99626 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.39□□□□□ -2.19
CDX2Q99626 RNU5F-2P-201ENST00000516066 82 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 SNORA25.17-201ENST00000517184 124 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.39□□□□□ -2.19
CDX2Q99626 COPS8P3-201ENST00000526024 482 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC023050.3-201ENST00000541142 333 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.39□□□□□ -2.19
CDX2Q99626 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.39□□□□□ -2.19
CDX2Q99626 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.39□□□□□ -2.19
CDX2Q99626 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC018889.1-201ENST00000605372 397 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC123912.5-201ENST00000605470 343 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AP001330.5-201ENST00000607176 411 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 AC022418.1-201ENST00000624118 445 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 MTND4P14-201ENST00000435799 1354 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 snoU2_19.1-201ENST00000362361 80 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RNU6-1085P-201ENST00000363576 107 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 SNORD32B-201ENST00000364460 84 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 Y_RNA.453-201ENST00000384223 109 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 SNORD14D-201ENST00000384390 87 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RNU6-1127P-201ENST00000384580 107 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 SNORA16.2-201ENST00000390991 127 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RPS29P13-201ENST00000402041 169 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AL033519.2-201ENST00000403958 392 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 Y_RNA.604-201ENST00000410574 102 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 Y_RNA.615-201ENST00000410769 117 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AL117339.3-201ENST00000418733 162 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AC243964.1-201ENST00000441814 261 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RPL39P29-201ENST00000447779 157 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AC073415.1-201ENST00000449240 153 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AC012308.1-201ENST00000451232 178 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.38□□□□□ -2.19
CDX2Q99626 AC093852.1-201ENST00000503587 266 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 PTP4A1P4-201ENST00000512479 322 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RNU2-69P-201ENST00000516061 100 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RNU6-1281P-201ENST00000516223 105 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 RNU6-970P-201ENST00000516312 107 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 SNORA40.12-201ENST00000516329 111 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDX2Q99626 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.38□□□□□ -2.19
CDX2Q99626 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.38□□□□□ -2.19
CDX2Q99626 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.38□□□□□ -2.19
CDX2Q99626 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.38□□□□□ -2.19
CDX2Q99626 MIR1273G-201ENST00000577677 100 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AC008536.2-201ENST00000607284 349 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
CDX2Q99626 U6atac.1-201ENST00000616025 117 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 uc_338.11-201ENST00000619132 160 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 AC090517.3-201ENST00000625170 141 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.38□□□□□ -2.19
CDX2Q99626 MIR1248-201ENST00000629190 106 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 MIR1321-201ENST00000637766 79 ntBASIC1.38□□□□□ -2.19
CDX2Q99626 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDX2Q99626 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDX2Q99626 RNU6-1287P-201ENST00000362914 107 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 Y_RNA.88-201ENST00000363029 99 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 Y_RNA.167-201ENST00000363735 109 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 Y_RNA.402-201ENST00000383972 102 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 RNU6-1060P-201ENST00000384664 107 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 MIR181A1-201ENST00000385026 110 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDX2Q99626 RNU6-903P-201ENST00000391270 109 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX2Q99626 CBX3P6-201ENST00000430257 527 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC027575.1-201ENST00000481064 460 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX2Q99626 MTCO2P30-201ENST00000503662 364 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX2Q99626 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.37□□□□□ -2.19
CDX2Q99626 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.37□□□□□ -2.19
CDX2Q99626 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX2Q99626 RNU6-1178P-201ENST00000516674 107 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 RNA5SP503-201ENST00000517047 117 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX2Q99626 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX2Q99626 SUB1P4-201ENST00000566062 339 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.37□□□□□ -2.19
CDX2Q99626 AP001094.1-201ENST00000579805 193 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 BNIP3P16-201ENST00000589779 534 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC010525.2-201ENST00000590920 195 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 VN1R107P-201ENST00000601784 209 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC012507.3-201ENST00000603556 477 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 CTHRC1P1-201ENST00000605383 469 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC002553.4-201ENST00000616896 331 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC022306.2-201ENST00000617563 647 ntBASIC1.37□□□□□ -2.19
CDX2Q99626 AC073534.2-201ENST00000620377 381 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms