Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU4-15P-201ENST00000362613 141 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 RNU6-234P-201ENST00000365229 104 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 MIR7-2-201ENST00000384970 110 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 RNU11-3P-201ENST00000391111 133 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 MTCYBP2-201ENST00000407745 171 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.49□□□□□ -2.17
SCN2AQ99250 snoU13.30-201ENST00000458951 104 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 RNU7-95P-201ENST00000459222 64 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.49□□□□□ -2.17
SCN2AQ99250 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.49□□□□□ -2.17
SCN2AQ99250 AC114801.2-201ENST00000503825 781 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 SNORA4.4-201ENST00000515921 135 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.49□□□□□ -2.17
SCN2AQ99250 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SCN2AQ99250 AL132822.1-201ENST00000617063 513 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.49□□□□□ -2.17
SCN2AQ99250 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
SCN2AQ99250 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SCN2AQ99250 MIR337-201ENST00000362281 93 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 Y_RNA.796-201ENST00000364268 102 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 Y_RNA.799-201ENST00000364992 102 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 Y_RNA.332-201ENST00000365271 113 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SCN2AQ99250 MIR489-201ENST00000384923 84 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 SUMO2P12-201ENST00000405924 140 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.49□□□□□ -2.17
SCN2AQ99250 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 RNU6-256P-201ENST00000516747 97 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 AL162373.1-201ENST00000620433 407 ntBASIC1.49□□□□□ -2.17
SCN2AQ99250 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SCN2AQ99250 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN2AQ99250 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
SCN2AQ99250 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN2AQ99250 RNU6-661P-201ENST00000362409 107 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 SNORA16.1-201ENST00000364597 132 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 Y_RNA.414-201ENST00000384011 101 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AL033519.2-201ENST00000403958 392 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AL356379.1-201ENST00000414105 126 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 UBE2V1P4-201ENST00000425374 344 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 MRPS10P2-201ENST00000431226 381 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN2AQ99250 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN2AQ99250 HMGN2P26-201ENST00000463169 339 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 SNRPGP7-201ENST00000469016 106 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN2AQ99250 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 RNU6-358P-201ENST00000516564 75 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 RNU5F-4P-201ENST00000516581 114 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AC107953.1-201ENST00000522216 297 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AC016957.1-201ENST00000534895 309 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN2AQ99250 MIR5006-201ENST00000583027 110 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 Z98751.3-201ENST00000604447 521 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AP000654.2-201ENST00000605633 586 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AC104260.1-201ENST00000616660 539 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 AC009541.1-201ENST00000438279 2662 ntBASIC1.48□□□□□ -2.17
SCN2AQ99250 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SCN2AQ99250 Y_RNA.490-201ENST00000384413 102 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 MIR1262-201ENST00000408276 93 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC009161.1-201ENST00000417306 376 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC243428.1-201ENST00000421099 264 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 RNU6-329P-201ENST00000459618 107 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN2AQ99250 HSPE1P4-201ENST00000550617 308 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC146944.4-201ENST00000602697 718 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 CYP2C61P-201ENST00000604072 290 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AP000907.4-201ENST00000604143 237 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC122108.2-201ENST00000611946 526 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN2AQ99250 Y_RNA.135-201ENST00000363439 95 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 Y_RNA.373-201ENST00000365600 103 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 RNA5SP219-201ENST00000390940 113 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 MIR548F1-201ENST00000408667 84 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 RNU2-7P-201ENST00000410794 178 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 USMG5P1-201ENST00000425964 177 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 CBX3P6-201ENST00000430257 527 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 RN7SL274P-201ENST00000492268 272 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN2AQ99250 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN2AQ99250 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN2AQ99250 MRPS36P4-201ENST00000534436 298 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN2AQ99250 MIR4742-201ENST00000581069 85 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 POLR3GP2-201ENST00000588366 668 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN2AQ99250 AC113139.1-201ENST00000605049 239 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 AC009248.2-201ENST00000619826 254 ntBASIC1.47□□□□□ -2.17
SCN2AQ99250 SNORA72.2-201ENST00000365028 127 ntBASIC1.46□□□□□ -2.18
SCN2AQ99250 AL139396.1-201ENST00000421137 167 ntBASIC1.46□□□□□ -2.18
SCN2AQ99250 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.46□□□□□ -2.18
SCN2AQ99250 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.46□□□□□ -2.18
SCN2AQ99250 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.46□□□□□ -2.18
SCN2AQ99250 RPS27P21-201ENST00000486977 252 ntBASIC1.46□□□□□ -2.18
SCN2AQ99250 AC022447.4-201ENST00000504053 364 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 258.7 ms