Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ACA59.2-201ENST00000517061 156 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 MIR3199-2-201ENST00000636243 86 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 AC068254.2-201ENST00000623938 3577 ntBASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTNAP3BQ96NU0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AL672167.1-203ENST00000641299 2975 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AL136164.3-201ENST00000624429 3978 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 SNORD114-7-201ENST00000362520 77 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 Y_RNA.93-201ENST00000363066 109 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 Y_RNA.107-201ENST00000363190 121 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 RNU1-20P-201ENST00000363314 162 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 MIR518C-201ENST00000384822 101 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 EI24P2-201ENST00000397776 1076 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AC073261.1-201ENST00000429409 121 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AF228730.3-201ENST00000436691 102 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 RN7SL517P-201ENST00000462240 305 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AL049861.1-201ENST00000603130 150 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AC093732.2-201ENST00000607950 274 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AC005086.4-201ENST00000623065 213 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 AL365361.1-201ENST00000566942 3481 ntBASIC4.11□□□□□ -1.75
CNTNAP3BQ96NU0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 AL672296.1-201ENST00000427780 2158 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 RNU1-75P-201ENST00000347264 129 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 CBX3P9-201ENST00000402326 552 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 RN7SKP156-201ENST00000410308 342 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 RNA5SP127-201ENST00000411051 133 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 Z75741.1-201ENST00000446793 314 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 S100A11P1-201ENST00000477525 312 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 SNORA18.4-201ENST00000516440 124 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 RNA5SP519-201ENST00000516480 119 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 AL162713.1-201ENST00000604480 262 ntBASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.1□□□□□ -1.75
CNTNAP3BQ96NU0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-1125P-201ENST00000363601 107 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 RNU4-41P-201ENST00000364426 143 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-1276P-201ENST00000365372 104 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 Y_RNA.362-201ENST00000365518 110 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 SNORA67.2-201ENST00000384300 149 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 SNORD116-13-201ENST00000384408 92 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 SNORA1.3-201ENST00000384676 136 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 CYCSP48-201ENST00000417124 323 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 AL591419.1-201ENST00000427423 339 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 AC099522.1-202ENST00000514718 367 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 RNU6-928P-201ENST00000516876 104 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 AL110115.1-201ENST00000614396 364 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 SNORD98-201ENST00000636377 67 ntBASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CNTNAP3BQ96NU0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CNTNAP3BQ96NU0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.76
CNTNAP3BQ96NU0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CNTNAP3BQ96NU0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNTNAP3BQ96NU0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CNTNAP3BQ96NU0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.08□□□□□ -1.76
CNTNAP3BQ96NU0 Y_RNA.124-201ENST00000363339 93 ntBASIC4.08□□□□□ -1.76
CNTNAP3BQ96NU0 RNA5SP126-201ENST00000365092 109 ntBASIC4.08□□□□□ -1.76
CNTNAP3BQ96NU0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms