Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-1125P-201ENST00000363601 107 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 Y_RNA.213-201ENST00000364178 111 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 SNORA63D-201ENST00000364359 132 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 RNY1P1-201ENST00000364372 112 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 SNORD14D-201ENST00000384390 87 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 MIR30B-201ENST00000384850 88 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 AC018634.1-201ENST00000437554 401 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 RBMY2UP-201ENST00000453474 324 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 AC093663.1-201ENST00000497190 394 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 AC096725.1-201ENST00000514266 313 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 RNU6-240P-201ENST00000516098 97 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 RNA5SP490-201ENST00000517141 136 ntBASIC4.6□□□□□ -1.67
LRCH3Q96II8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.6□□□□□ -1.67
LRCH3Q96II8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.6□□□□□ -1.67
LRCH3Q96II8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRCH3Q96II8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRCH3Q96II8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.6□□□□□ -1.67
LRCH3Q96II8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.6□□□□□ -1.67
LRCH3Q96II8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRCH3Q96II8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRCH3Q96II8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRCH3Q96II8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
LRCH3Q96II8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.59□□□□□ -1.67
LRCH3Q96II8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRCH3Q96II8 RNU6-497P-201ENST00000365316 104 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 RNU6-1276P-201ENST00000365372 104 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 RNU6-117P-201ENST00000365415 107 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.59□□□□□ -1.67
LRCH3Q96II8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
LRCH3Q96II8 RNU7-57P-201ENST00000459540 60 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.59□□□□□ -1.67
LRCH3Q96II8 RNA5SP367-201ENST00000516557 118 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 RNU6-504P-201ENST00000516568 104 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRCH3Q96II8 MIR3922-201ENST00000585192 84 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 AC000403.1-201ENST00000613696 3585 ntBASIC4.59□□□□□ -1.67
LRCH3Q96II8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
LRCH3Q96II8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRCH3Q96II8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRCH3Q96II8 Y_RNA.344-201ENST00000365381 112 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 MT-TI-201ENST00000387365 69 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 RNA5SP354-201ENST00000391247 136 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 SNORD108-201ENST00000459332 71 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC008155.2-201ENST00000464337 397 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 RN7SL807P-201ENST00000470923 297 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 RNY4P20-201ENST00000516678 93 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 SCARNA15-202ENST00000516881 127 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC107934.2-201ENST00000518653 310 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 U3.45-201ENST00000607547 219 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRCH3Q96II8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC006971.1-201ENST00000407916 4486 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 FAM35BP-202ENST00000497389 3337 ntBASIC4.58□□□□□ -1.68
LRCH3Q96II8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
LRCH3Q96II8 AC139713.2-215ENST00000641428 5037 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRCH3Q96II8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRCH3Q96II8 snoU2_19.1-201ENST00000362361 80 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 Y_RNA.73-201ENST00000362910 113 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 Y_RNA.290-201ENST00000364879 114 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 RNU6-748P-201ENST00000384648 107 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 RNU6-279P-201ENST00000391297 101 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 MIR1289-1-201ENST00000408836 144 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 EIF4EP4-201ENST00000424916 578 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 RNU2-13P-201ENST00000515909 113 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.57□□□□□ -1.68
LRCH3Q96II8 AC091152.3-201ENST00000604227 325 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 RNU6-91P-201ENST00000607774 107 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 IGLL4P-201ENST00000614590 133 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 MAPK10-320ENST00000641462 6696 ntBASIC4.57□□□□□ -1.68
LRCH3Q96II8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.57□□□□□ -1.68
LRCH3Q96II8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LRCH3Q96II8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRCH3Q96II8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRCH3Q96II8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRCH3Q96II8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRCH3Q96II8 RNU6-1210P-201ENST00000363775 107 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 Y_RNA.265-201ENST00000364677 108 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 RNU6-787P-201ENST00000384032 107 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 RNU6-242P-201ENST00000384359 107 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.56□□□□□ -1.68
LRCH3Q96II8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 RNA5SP497-201ENST00000516081 97 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.56□□□□□ -1.68
LRCH3Q96II8 RPL17P51-201ENST00000605218 238 ntBASIC4.56□□□□□ -1.68
LRCH3Q96II8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRCH3Q96II8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRCH3Q96II8 AC058791.1-201ENST00000608412 3198 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms