Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 HMGN2P6-201ENST00000551091 273 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 AC020891.4-201ENST00000605745 93 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 AC244107.2-201ENST00000611773 76 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 MIR6837-201ENST00000620884 64 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 uc_338.7-201ENST00000621834 124 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 SNORD3E-202ENST00000627253 216 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 MIR1248-201ENST00000629190 106 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 U6.108-201ENST00000637764 58 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
MS4A3Q96HJ5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
MS4A3Q96HJ5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.65□□□□□ -1.66
MS4A3Q96HJ5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
MS4A3Q96HJ5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.65□□□□□ -1.66
MS4A3Q96HJ5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 RNU6-198P-201ENST00000384258 104 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 RPL37P18-201ENST00000411602 243 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 AC123900.1-201ENST00000420390 96 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 GOT2P5-201ENST00000433995 546 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 SPINT5P-201ENST00000448174 155 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 UBL5P3-201ENST00000475112 231 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 RN7SL504P-201ENST00000494496 287 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 IGLV3-17-201ENST00000519099 244 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 AC069240.1-201ENST00000548774 375 ntBASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
MS4A3Q96HJ5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RNU5F-1-201ENST00000362507 117 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 SNORA25.9-201ENST00000365087 128 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RNU6-171P-201ENST00000384354 107 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RNU6-540P-201ENST00000384622 101 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 MIR105-1-201ENST00000385222 81 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RNU6-1307P-201ENST00000391012 103 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RNU6-587P-201ENST00000391282 106 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 AC011753.3-201ENST00000443436 406 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RPL32P34-201ENST00000486380 400 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 AC025554.1-201ENST00000505641 188 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 RNU6-586P-201ENST00000517265 104 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 MIR1269B-201ENST00000580405 75 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 MIR1297-201ENST00000637311 77 ntBASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
MS4A3Q96HJ5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP183-201ENST00000362452 119 ntBASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 FGF7P7-201ENST00000514120 227 ntBASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 SCARNA21.2-201ENST00000516600 166 ntBASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 RNU6-965P-201ENST00000516721 96 ntBASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP373-201ENST00000517271 95 ntBASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 AC074101.1-201ENST00000637861 241 ntBASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.63□□□□□ -1.67
MS4A3Q96HJ5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 AC104623.2-202ENST00000623477 4002 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 RNU4-82P-201ENST00000362443 140 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 SNORA25.6-201ENST00000364121 118 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP189-201ENST00000364920 115 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 SNORA67-201ENST00000384423 137 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 SNORD38.2-201ENST00000384470 69 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 MIR1286-201ENST00000408112 78 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 AC104333.2-201ENST00000422630 192 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 AL450023.3-201ENST00000440592 271 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms