Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRF1Q92994 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRF1Q92994 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
BRF1Q92994 MIR22-201ENST00000362190 85 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 Y_RNA.40-201ENST00000362645 93 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 SNORD114-19-201ENST00000363072 75 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 Y_RNA.150-201ENST00000363562 102 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 Y_RNA.418-201ENST00000384029 102 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 RNU6-514P-201ENST00000384208 107 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 MIR147B-201ENST00000390185 80 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 SNORA46.1-201ENST00000391069 153 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AL133475.1-201ENST00000404414 305 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 RNA5SP201-201ENST00000410316 124 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 Y_RNA.626-201ENST00000411288 95 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 ELOCP21-201ENST00000412558 336 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AIMP1P2-201ENST00000425294 312 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF1Q92994 UQCRBP2-201ENST00000447827 297 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AC005042.3-201ENST00000453230 174 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AC091179.3-201ENST00000474761 144 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AC008885.1-201ENST00000514930 301 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.56□□□□□ -1.84
BRF1Q92994 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF1Q92994 Z83818.1-201ENST00000603584 150 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 SNRPGP20-201ENST00000604477 205 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.56□□□□□ -1.84
BRF1Q92994 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRF1Q92994 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.55□□□□□ -1.84
BRF1Q92994 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRF1Q92994 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
BRF1Q92994 RNA5SP374-201ENST00000362939 125 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 SNORA38.1-201ENST00000364172 131 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 Y_RNA.292-201ENST00000364904 97 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 Y_RNA.383-201ENST00000383855 97 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 PCNPP3-201ENST00000393579 471 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 AL512633.1-201ENST00000399931 655 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 MIR548M-201ENST00000408260 86 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 RPL19P1-201ENST00000411635 428 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 SETP5-201ENST00000437270 562 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 POLR2KP2-201ENST00000438155 177 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 NDUFB4P10-201ENST00000452541 359 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 RNU6-625P-201ENST00000459412 107 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 AC091959.1-201ENST00000495857 238 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 AC055872.1-201ENST00000570978 278 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 AC011921.3-201ENST00000605540 361 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 uc_338.14-201ENST00000613162 166 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 PCGEM1.1-201ENST00000613431 131 ntBASIC3.55□□□□□ -1.84
BRF1Q92994 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.55□□□□□ -1.84
BRF1Q92994 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.54□□□□□ -1.84
BRF1Q92994 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
BRF1Q92994 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.54□□□□□ -1.84
BRF1Q92994 Y_RNA.464-201ENST00000384282 110 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 Y_RNA.498-201ENST00000384460 102 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 RNA5SP274-201ENST00000410484 108 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 RNU2-61P-201ENST00000411069 191 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.54□□□□□ -1.84
BRF1Q92994 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.54□□□□□ -1.84
BRF1Q92994 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
BRF1Q92994 RN7SL633P-201ENST00000488974 297 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.54□□□□□ -1.84
BRF1Q92994 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.54□□□□□ -1.84
BRF1Q92994 AL137100.2-201ENST00000555786 315 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.54□□□□□ -1.84
BRF1Q92994 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 AL137843.1-201ENST00000605078 385 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.54□□□□□ -1.84
BRF1Q92994 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRF1Q92994 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
BRF1Q92994 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.53□□□□□ -1.84
BRF1Q92994 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BRF1Q92994 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
BRF1Q92994 SNORA18.3-201ENST00000384122 132 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 RNU6-1310P-201ENST00000384153 107 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 RNU6-378P-201ENST00000384324 107 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 RN7SKP220-201ENST00000410611 288 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 RAB28P5-201ENST00000427490 651 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 IFNA11P-201ENST00000446352 526 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 SNORD2.1-201ENST00000458762 69 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 AC103975.1-201ENST00000482506 483 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 RN7SKP43-201ENST00000516173 320 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.53□□□□□ -1.84
BRF1Q92994 AC026470.2-201ENST00000561492 181 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 AC007179.3-201ENST00000604976 235 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
BRF1Q92994 AC000403.1-201ENST00000613696 3585 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 AP003122.5-201ENST00000527668 3766 ntBASIC3.53□□□□□ -1.84
BRF1Q92994 AC135776.4-201ENST00000624300 1904 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.52□□□□□ -1.85
BRF1Q92994 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRF1Q92994 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRF1Q92994 SNORA72.2-201ENST00000365028 127 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 MIR549A-201ENST00000385268 96 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 Y_RNA.590-201ENST00000410140 107 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.52□□□□□ -1.85
BRF1Q92994 HMGN2P20-201ENST00000437531 273 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 MRPS10P1-201ENST00000448483 130 ntBASIC3.52□□□□□ -1.85
BRF1Q92994 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms