Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC097463.2-201ENST00000421074 142 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 Z98742.2-201ENST00000431564 187 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 AC112220.1-201ENST00000434628 355 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
USP48Q86UV5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.84□□□□□ -1.79
USP48Q86UV5 SNORA31.6-201ENST00000516241 130 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 AC023824.2-201ENST00000566185 400 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 AC011476.5-201ENST00000615594 130 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.84□□□□□ -1.8
USP48Q86UV5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
USP48Q86UV5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.84□□□□□ -1.8
USP48Q86UV5 BX322639.1-202ENST00000423987 2213 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 ZNF204P-201ENST00000416749 2397 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 Y_RNA.274-201ENST00000364714 101 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 MIR548H3-201ENST00000408771 118 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.83□□□□□ -1.8
USP48Q86UV5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.83□□□□□ -1.8
USP48Q86UV5 MRPS36P2-201ENST00000512569 299 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 AC091826.1-201ENST00000514065 313 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 RNU6-1338P-201ENST00000516328 91 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.83□□□□□ -1.8
USP48Q86UV5 MIR2682-201ENST00000580305 110 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 MIR4765-201ENST00000585007 77 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.83□□□□□ -1.8
USP48Q86UV5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 SNORA7.4-201ENST00000384249 137 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 MIR329-1-201ENST00000385028 80 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 RNA5SP201-201ENST00000410316 124 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AL139156.1-201ENST00000412785 841 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.82□□□□□ -1.8
USP48Q86UV5 AC096920.1-201ENST00000423991 241 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.82□□□□□ -1.8
USP48Q86UV5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.82□□□□□ -1.8
USP48Q86UV5 RPS3P1-201ENST00000456781 192 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 RPL23AP70-201ENST00000483361 460 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 RAC1P5-201ENST00000512182 576 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.82□□□□□ -1.8
USP48Q86UV5 RRN3P3-201ENST00000549207 578 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 MIR5047-201ENST00000579212 100 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AC107294.3-201ENST00000609211 526 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AC010999.1-201ENST00000611856 324 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AC002064.3-201ENST00000623448 346 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 AC026241.1-201ENST00000517873 2142 ntBASIC3.82□□□□□ -1.8
USP48Q86UV5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
USP48Q86UV5 SNORA71.1-201ENST00000364523 117 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 Y_RNA.269-201ENST00000364685 89 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 Y_RNA.277-201ENST00000364754 102 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 Y_RNA.352-201ENST00000365439 102 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 RNU6-245P-201ENST00000384020 107 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 RNU6-1145P-201ENST00000384246 107 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 RNU6-378P-201ENST00000384324 107 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 RNU6-102P-201ENST00000384485 104 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 Y_RNA.581-201ENST00000391017 97 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.81□□□□□ -1.8
USP48Q86UV5 PIGPP3-201ENST00000425307 415 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.81□□□□□ -1.8
USP48Q86UV5 CST9LP2-201ENST00000437612 320 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 RPS23P5-201ENST00000495419 428 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 RNA5SP112-201ENST00000515937 99 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 SNORA25.14-201ENST00000516481 132 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 SNORA81.3-201ENST00000517283 198 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 SNRPGP20-201ENST00000604477 205 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 uc_338.1-201ENST00000612113 180 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 FTX_2.1-201ENST00000618816 94 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 AC099654.7-201ENST00000635788 2127 ntBASIC3.81□□□□□ -1.8
USP48Q86UV5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.81□□□□□ -1.8
USP48Q86UV5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP48Q86UV5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
USP48Q86UV5 RNU4-15P-201ENST00000362613 141 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 SNORD81.1-201ENST00000363064 77 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 RNU6-937P-201ENST00000384325 106 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 Y_RNA.555-201ENST00000384673 110 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.8□□□□□ -1.8
USP48Q86UV5 AC022018.1-201ENST00000430685 241 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.8□□□□□ -1.8
USP48Q86UV5 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 AC245166.1-201ENST00000521012 253 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 AC103810.1-201ENST00000579873 453 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.8□□□□□ -1.8
USP48Q86UV5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.8□□□□□ -1.8
USP48Q86UV5 AL136360.1-201ENST00000503377 1900 ntBASIC3.8□□□□□ -1.8
USP48Q86UV5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP48Q86UV5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
USP48Q86UV5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
USP48Q86UV5 AC000403.1-201ENST00000613696 3585 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.79□□□□□ -1.8
USP48Q86UV5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP48Q86UV5 Y_RNA.65-201ENST00000362846 100 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 SNORA54-201ENST00000384281 123 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP48Q86UV5 MIR1261-201ENST00000408659 82 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 EIF4EP4-201ENST00000424916 578 ntBASIC3.79□□□□□ -1.8
USP48Q86UV5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms