Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF180Q86T96 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF180Q86T96 AC010999.1-201ENST00000611856 324 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RNF180Q86T96 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF180Q86T96 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.18□□□□□ -1.9
RNF180Q86T96 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RNF180Q86T96 RNU6-1301P-201ENST00000362724 104 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 Y_RNA.179-201ENST00000363844 90 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 SNORD32B-201ENST00000364460 84 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 RNU6-281P-201ENST00000384212 103 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF180Q86T96 SDAD1P3-201ENST00000427380 333 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AC090515.1-201ENST00000465295 476 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF180Q86T96 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 Y_RNA.683-201ENST00000516508 93 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 RNU6-1046P-201ENST00000516538 107 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 RN7SKP49-201ENST00000516675 260 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 SNORA48.11-201ENST00000517015 89 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AC109329.2-201ENST00000519658 482 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AC018630.3-201ENST00000542637 96 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AL355297.2-201ENST00000604792 129 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
RNF180Q86T96 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RNF180Q86T96 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF180Q86T96 RNU1-62P-201ENST00000362599 164 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 RNU6-26P-201ENST00000383985 107 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 RNU6-793P-201ENST00000384233 104 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 Y_RNA.551-201ENST00000384661 102 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 MIR95-201ENST00000385072 81 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 SNORA12-201ENST00000391162 147 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 Y_RNA.595-201ENST00000410403 105 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF180Q86T96 AL358176.2-201ENST00000425769 204 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF180Q86T96 AC004386.2-201ENST00000441858 148 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 AL513328.1-201ENST00000446460 224 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 FCF1P4-201ENST00000448326 183 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 U8.22-201ENST00000459141 133 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.17□□□□□ -1.9
RNF180Q86T96 RNU5F-4P-201ENST00000516581 114 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 Y_RNA.715-201ENST00000517082 110 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 MIR5006-201ENST00000583027 110 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 AL355297.3-201ENST00000604082 446 ntBASIC3.17□□□□□ -1.9
RNF180Q86T96 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF180Q86T96 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RNF180Q86T96 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF180Q86T96 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF180Q86T96 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF180Q86T96 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF180Q86T96 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 RNU6-450P-201ENST00000364654 107 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 SNORA18.2-201ENST00000383865 132 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RNF180Q86T96 AL138827.1-201ENST00000402666 306 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 MIR1252-201ENST00000408861 65 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 AL445305.1-201ENST00000432577 575 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 MTND3P2-201ENST00000438452 342 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 UBBP3-201ENST00000445497 241 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 RPS23P5-201ENST00000495419 428 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 YWHAEP4-201ENST00000505390 198 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF180Q86T96 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF180Q86T96 AC113195.1-201ENST00000579952 141 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 AL121655.1-201ENST00000605811 308 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 AL590808.1-201ENST00000618696 141 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
RNF180Q86T96 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF180Q86T96 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF180Q86T96 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 RNU6-546P-201ENST00000383991 107 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 RNU6-1105P-201ENST00000384774 107 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 MIR561-201ENST00000385216 97 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AL356057.3-201ENST00000402607 340 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 RNU6-1001P-201ENST00000411265 100 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF180Q86T96 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF180Q86T96 DPH3P2-201ENST00000422618 250 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 BX679664.1-201ENST00000434429 253 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AC009237.7-201ENST00000447357 229 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF180Q86T96 U8.20-201ENST00000459445 131 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.15□□□□□ -1.91
RNF180Q86T96 RNU6-344P-201ENST00000516635 111 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 RNU2-44P-201ENST00000516795 194 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 RN7SKP40-201ENST00000517211 242 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms