Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-915P-201ENST00000364943 103 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 Y_RNA.521-201ENST00000384560 114 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 SNORA26.3-201ENST00000391119 136 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 AL355497.1-201ENST00000406262 551 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 RN7SL601P-201ENST00000471221 293 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 RPL23AP70-201ENST00000483361 460 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 SNORA31.16-201ENST00000516773 139 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF43Q68DV7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 MIR4513-201ENST00000581077 86 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 AL391903.3-201ENST00000612158 163 ntBASIC3.83□□□□□ -1.8
RNF43Q68DV7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF43Q68DV7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF43Q68DV7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF43Q68DV7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF43Q68DV7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF43Q68DV7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF43Q68DV7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF43Q68DV7 RNU1-62P-201ENST00000362599 164 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 RNA5SP424-201ENST00000390988 115 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 CYCSP4-201ENST00000429682 331 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF43Q68DV7 HMGB3P8-201ENST00000449709 577 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 AL645939.1-201ENST00000453429 797 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 SNORA31.8-201ENST00000516327 108 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 RNU6-107P-201ENST00000516643 102 ntBASIC3.82□□□□□ -1.8
RNF43Q68DV7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF43Q68DV7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF43Q68DV7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF43Q68DV7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RNF43Q68DV7 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 SNORA25.7-201ENST00000364375 127 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 Y_RNA.393-201ENST00000383936 102 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 SNORA48.2-201ENST00000390926 124 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 AL031003.1-201ENST00000404229 172 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 CYCSP49-201ENST00000420810 319 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 AL159169.1-201ENST00000421119 127 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 AC019205.3-201ENST00000424573 156 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 RPL39P29-201ENST00000447779 157 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF43Q68DV7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF43Q68DV7 MIR5582-201ENST00000579697 68 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 AC108081.1-201ENST00000604358 221 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 FTX_3.1-201ENST00000610451 147 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF43Q68DV7 MIR3914-2-201ENST00000637339 95 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 MIR3529-201ENST00000637713 78 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF43Q68DV7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF43Q68DV7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF43Q68DV7 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
RNF43Q68DV7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF43Q68DV7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF43Q68DV7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RNF43Q68DV7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF43Q68DV7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF43Q68DV7 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 SNORD115-30-201ENST00000364117 82 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 RNU6-335P-201ENST00000364563 113 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 RNU6-1264P-201ENST00000383891 107 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 RNU1-73P-201ENST00000383971 164 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 SNORA18.3-201ENST00000384122 132 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 MIR526A2-201ENST00000390198 65 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 AL606845.1-201ENST00000404881 255 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 YPEL5P1-201ENST00000419731 367 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 AC063976.4-201ENST00000421971 163 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 RPS27P1-201ENST00000450552 247 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 HSPE1P13-201ENST00000451143 297 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 RPS4XP13-201ENST00000483219 789 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 RN7SKP289-201ENST00000517244 295 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF43Q68DV7 AP000553.6-201ENST00000641242 118 ntBASIC3.8□□□□□ -1.8
RNF43Q68DV7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RNF43Q68DV7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF43Q68DV7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF43Q68DV7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RNF43Q68DV7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF43Q68DV7 AL136164.4-201ENST00000625013 2135 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF43Q68DV7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 SNORA40.5-201ENST00000391061 128 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF43Q68DV7 RPL26P9-201ENST00000457466 433 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 SNORD105B-201ENST00000458770 79 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 snoU13.4-201ENST00000458916 104 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 AC090525.1-201ENST00000479116 478 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 AL049873.1-201ENST00000480540 376 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 CKS1BP7-201ENST00000522230 235 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 MIR3124-201ENST00000582636 67 ntBASIC3.79□□□□□ -1.8
RNF43Q68DV7 SNRPGP15-201ENST00000600149 222 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms