Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 MIR448-201ENST00000362131 111 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 SNORA38.1-201ENST00000364172 131 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 RNU6-1280P-201ENST00000365211 107 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 Y_RNA.346-201ENST00000365385 112 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 Y_RNA.348-201ENST00000365403 103 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 U6atac.2-201ENST00000408644 118 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 RN7SKP19-201ENST00000516016 252 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 RNA5SP154-201ENST00000516193 111 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 RNU6-781P-201ENST00000516377 101 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 SNORA70.18-201ENST00000516696 98 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 AC091178.2-201ENST00000584401 117 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 RPL30P11-203ENST00000598995 310 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 U6.115-201ENST00000636045 103 ntBASIC4.63□□□□□ -1.67
RC3H1Q5TC82 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 RNU6-217P-201ENST00000384164 104 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 MIR128-1-201ENST00000384921 82 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 HSPE1P21-201ENST00000438283 308 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 AC012308.1-201ENST00000451232 178 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 RNU6-344P-201ENST00000516635 111 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 AC090897.2-201ENST00000581715 130 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 AC012493.2-201ENST00000595083 291 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 AC025754.2-201ENST00000606491 432 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 SNORD11B-201ENST00000607707 90 ntBASIC4.62□□□□□ -1.67
RC3H1Q5TC82 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RC3H1Q5TC82 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 RNU4-35P-201ENST00000362588 141 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 RNU6-640P-201ENST00000363693 105 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 Y_RNA.558-201ENST00000384685 113 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 MIRLET7F2-201ENST00000385277 83 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 MIR1278-201ENST00000408753 81 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 TOMM22P2-201ENST00000430735 237 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 RPS4XP2-201ENST00000458402 793 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 RNU6-762P-201ENST00000517107 102 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 AC008011.1-201ENST00000545989 227 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 MIR3136-201ENST00000583498 78 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 uc_338.32-201ENST00000615087 172 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 SNORD98-201ENST00000636377 67 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 AC068205.3-201ENST00000636385 468 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.61□□□□□ -1.67
RC3H1Q5TC82 IPO8P1-201ENST00000455509 3109 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 AL035425.3-201ENST00000564206 4996 ntBASIC4.61□□□□□ -1.67
RC3H1Q5TC82 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AC011266.1-201ENST00000624119 3569 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RNU6-978P-201ENST00000364371 103 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RNU6-335P-201ENST00000364563 113 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RNU6-622P-201ENST00000384272 103 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 SNORD17-201ENST00000390930 237 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 SNORD72-201ENST00000390994 80 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RNU6-1275P-201ENST00000391087 107 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AL603914.1-201ENST00000401964 204 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 SNORA36B-201ENST00000410438 131 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RNU6-554P-201ENST00000410466 106 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RNA5SP39-201ENST00000411245 120 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AC017083.1-201ENST00000428093 483 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AC004386.2-201ENST00000441858 148 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 snoU13.4-201ENST00000458916 104 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AL049873.1-201ENST00000480540 376 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 SNORA70.12-201ENST00000516084 153 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 MIR3923-201ENST00000579521 83 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 AC131055.1-201ENST00000584626 316 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 MIR7112-201ENST00000616126 65 ntBASIC4.6□□□□□ -1.67
RC3H1Q5TC82 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.6□□□□□ -1.67
RC3H1Q5TC82 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RC3H1Q5TC82 RNU1-108P-201ENST00000362556 161 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 SNORD18B-201ENST00000365659 72 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RC3H1Q5TC82 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RC3H1Q5TC82 RNU6-136P-201ENST00000384663 107 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 CBX3P9-201ENST00000402326 552 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 DBIP2-201ENST00000419076 262 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AC099548.1-201ENST00000421443 426 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 U3.44-201ENST00000458938 192 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms