Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATP13A4Q4VNC1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.11□□□□□ -1.91
ATP13A4Q4VNC1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 Y_RNA.19-201ENST00000362462 99 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 RNA5SP374-201ENST00000362939 125 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-944P-201ENST00000364023 107 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-713P-201ENST00000384761 107 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 CBX3P6-201ENST00000430257 527 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 PCNPP5-201ENST00000452246 481 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 RNU2-44P-201ENST00000516795 194 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 RN7SKP40-201ENST00000517211 242 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AC023824.2-201ENST00000566185 400 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 MIR4503-201ENST00000582187 83 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 MIR5006-201ENST00000583027 110 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AC023043.3-201ENST00000593113 385 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 AL356280.1-201ENST00000603614 379 ntBASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.1□□□□□ -1.91
ATP13A4Q4VNC1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-574P-201ENST00000384265 107 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 Y_RNA.512-201ENST00000384518 102 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-220P-201ENST00000390919 107 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 MIR1294-201ENST00000408503 142 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AC004866.1-201ENST00000411748 78 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AL445687.1-201ENST00000439946 251 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AC009237.7-201ENST00000447357 229 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 SNORA40.9-201ENST00000515895 93 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 RNU6-344P-201ENST00000516635 111 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 MIR3117-201ENST00000584034 78 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 AL357075.2-201ENST00000614906 189 ntBASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.09□□□□□ -1.91
ATP13A4Q4VNC1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ATP13A4Q4VNC1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATP13A4Q4VNC1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 RNU6-727P-201ENST00000363592 107 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 RNA5SP492-201ENST00000411330 114 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 RPS29P6-201ENST00000438196 145 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 IFNA11P-201ENST00000446352 526 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 CYP2C59P-201ENST00000457790 269 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 CKS1BP2-201ENST00000497342 240 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 AC018630.3-201ENST00000542637 96 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 AL161670.1-201ENST00000554348 137 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 MYL12BP1-201ENST00000569826 507 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 U4.1-201ENST00000620349 87 ntBASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATP13A4Q4VNC1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 Y_RNA.64-201ENST00000362845 102 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 Y_RNA.143-201ENST00000363520 106 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 RNU6-806P-201ENST00000365147 105 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 Y_RNA.452-201ENST00000384202 108 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 MIR95-201ENST00000385072 81 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 AL033519.2-201ENST00000403958 392 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 AL161788.1-201ENST00000441805 169 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 UQCRBP2-201ENST00000447827 297 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 LINC01399-202ENST00000458450 244 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 RPL26P26-201ENST00000480251 434 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 RN7SL283P-201ENST00000489055 303 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 AC074133.1-201ENST00000515696 183 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 MIR3149-201ENST00000584629 83 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 MIR8062-201ENST00000621515 85 ntBASIC3.07□□□□□ -1.92
ATP13A4Q4VNC1 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 Y_RNA.26-201ENST00000362539 101 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 Y_RNA.222-201ENST00000364264 102 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 SNORA71.1-201ENST00000364523 117 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 RNA5SP240-201ENST00000365355 128 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 RNU2-63P-201ENST00000410792 194 ntBASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.06□□□□□ -1.92
ATP13A4Q4VNC1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms