Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC091874.1-201ENST00000511402 339 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RNU5F-4P-201ENST00000516581 114 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC026470.2-201ENST00000561492 181 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.85□□□□□ -2.27
FOXF1Q12946 MIR5094-201ENST00000578766 85 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 MTATP6P3-201ENST00000581686 676 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.85□□□□□ -2.27
FOXF1Q12946 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.85□□□□□ -2.27
FOXF1Q12946 AC091931.1-201ENST00000623488 728 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 AC120349.3-201ENST00000624377 529 ntBASIC0.85□□□□□ -2.27
FOXF1Q12946 ICE2P2-201ENST00000483823 2787 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC010615.1-201ENST00000594254 1764 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.27
FOXF1Q12946 Y_RNA.164-201ENST00000363709 102 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 RNU6-996P-201ENST00000365438 107 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 SNORA70.7-201ENST00000384159 133 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 RNU6-348P-201ENST00000384386 107 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 Y_RNA.504-201ENST00000384481 104 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AL117342.1-201ENST00000404861 406 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 RNU2-9P-201ENST00000410194 145 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.84□□□□□ -2.27
FOXF1Q12946 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.84□□□□□ -2.27
FOXF1Q12946 ARL5AP1-201ENST00000418991 388 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.84□□□□□ -2.27
FOXF1Q12946 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.84□□□□□ -2.27
FOXF1Q12946 CETN4P-201ENST00000432407 469 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC099677.2-201ENST00000436385 175 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.84□□□□□ -2.27
FOXF1Q12946 RNU7-63P-201ENST00000459054 62 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 RNU7-14P-201ENST00000459331 62 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 SNRPGP7-201ENST00000469016 106 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.84□□□□□ -2.27
FOXF1Q12946 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.84□□□□□ -2.27
FOXF1Q12946 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
FOXF1Q12946 AC010493.1-201ENST00000513479 292 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 SNORA14.1-201ENST00000516113 141 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 CBX3P8-201ENST00000532412 525 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.84□□□□□ -2.27
FOXF1Q12946 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.84□□□□□ -2.27
FOXF1Q12946 AC040904.1-201ENST00000590850 223 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC087683.1-201ENST00000591187 441 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 NIFKP6-201ENST00000598115 845 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 CTHRC1P1-201ENST00000605383 469 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 RNU6-85P-201ENST00000605989 107 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC008536.2-201ENST00000607284 349 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC087683.2-201ENST00000611384 326 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 uc_338.34-201ENST00000617467 174 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 AC008147.4-201ENST00000617570 1204 ntBASIC0.84□□□□□ -2.27
FOXF1Q12946 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.28
FOXF1Q12946 AL159152.1-201ENST00000635019 2587 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 MIR96-201ENST00000362288 78 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 RNU6-227P-201ENST00000362865 103 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 Y_RNA.169-201ENST00000363745 96 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 RNU6-1026P-201ENST00000384465 108 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 MIR208B-201ENST00000401172 77 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 RN7SKP142-201ENST00000411236 328 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 AC027119.1-201ENST00000440877 241 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 RNU6-1037P-201ENST00000459571 107 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 RPS29P27-201ENST00000463711 170 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
FOXF1Q12946 MTND4P7-201ENST00000523876 130 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.83□□□□□ -2.28
FOXF1Q12946 MIR4528-201ENST00000577763 90 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.83□□□□□ -2.28
FOXF1Q12946 HULC.1-201ENST00000612720 240 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 AC103705.1-201ENST00000619013 241 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.83□□□□□ -2.28
FOXF1Q12946 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
FOXF1Q12946 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
FOXF1Q12946 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
FOXF1Q12946 MTND5P35-201ENST00000557537 1720 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 RNU5B-2P-201ENST00000363036 113 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 SNORD1A-201ENST00000364968 72 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 SNORA72.2-201ENST00000365028 127 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MIR515-2-201ENST00000384883 83 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MIR515-1-201ENST00000384884 83 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.82□□□□□ -2.28
FOXF1Q12946 RPL21P111-201ENST00000418453 477 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MTCO2P19-201ENST00000427513 598 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.82□□□□□ -2.28
FOXF1Q12946 TOMM22P2-201ENST00000430735 237 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MTCO3P29-201ENST00000432119 779 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AL358934.1-201ENST00000432346 324 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 USP9YP28-201ENST00000435142 589 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 HSPE1P9-201ENST00000440046 311 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.82□□□□□ -2.28
FOXF1Q12946 AC079140.2-201ENST00000506193 142 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 CCDC34P1-201ENST00000507441 517 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AC108078.1-201ENST00000508073 725 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 RNU6-612P-201ENST00000516909 102 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 RNA5SP437-201ENST00000517249 129 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AC087854.1-201ENST00000519706 414 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AC019288.1-201ENST00000557918 224 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.82□□□□□ -2.28
FOXF1Q12946 AC090517.1-201ENST00000569307 266 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms