Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC068205.3-201ENST00000636385 468 ntBASIC3.74□□□□□ -1.81
SOX4Q06945 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOX4Q06945 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SOX4Q06945 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SOX4Q06945 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOX4Q06945 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX4Q06945 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 RNU6-529P-201ENST00000363383 104 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 RNU6-153P-201ENST00000364422 104 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 Y_RNA.243-201ENST00000364481 109 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 RNU6-969P-201ENST00000383900 105 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 RNU6-80P-201ENST00000384195 107 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 SNORA1.3-201ENST00000384676 136 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 MIR616-201ENST00000385293 97 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 AL138878.1-201ENST00000405131 347 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 RPL23AP58-201ENST00000440453 469 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX4Q06945 AC107626.1-201ENST00000471084 183 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 AC006445.2-201ENST00000510061 472 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 RNU1-117P-201ENST00000517041 158 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX4Q06945 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX4Q06945 AL110115.1-201ENST00000614396 364 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 TCL6_2.1-201ENST00000615162 119 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 AC005562.2-201ENST00000618264 111 ntBASIC3.73□□□□□ -1.81
SOX4Q06945 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX4Q06945 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX4Q06945 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX4Q06945 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SOX4Q06945 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX4Q06945 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX4Q06945 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX4Q06945 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX4Q06945 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
SOX4Q06945 AL356274.2-201ENST00000624379 3752 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AC110774.1-201ENST00000623567 2018 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 SNORD6-201ENST00000365444 73 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 Y_RNA.368-201ENST00000365547 113 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX4Q06945 SNORA9-201ENST00000384215 133 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 SNORD37.2-201ENST00000391075 66 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 RNU6-855P-201ENST00000410395 104 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AC005326.1-201ENST00000429197 123 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AL121914.1-201ENST00000450188 156 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AC245047.8-201ENST00000456455 284 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 BX510359.1-201ENST00000456973 237 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 RNU2-27P-201ENST00000516185 142 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 EIF4A1P12-201ENST00000551910 141 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AC027176.1-201ENST00000560204 514 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 MIR5006-201ENST00000583027 110 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.72□□□□□ -1.81
SOX4Q06945 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX4Q06945 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX4Q06945 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
SOX4Q06945 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX4Q06945 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SOX4Q06945 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.81
SOX4Q06945 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SOX4Q06945 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SOX4Q06945 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX4Q06945 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX4Q06945 Y_RNA.341-201ENST00000365341 102 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 RNU1-89P-201ENST00000384592 164 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 MIR526A2-201ENST00000390198 65 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 Z98941.1-201ENST00000407764 100 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 RNA5SP504-201ENST00000410676 117 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SOX4Q06945 RNU7-197P-201ENST00000458836 62 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX4Q06945 RNU4-57P-201ENST00000515980 135 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.71□□□□□ -1.82
SOX4Q06945 AC091152.3-201ENST00000604227 325 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 MIR8058-201ENST00000615737 89 ntBASIC3.71□□□□□ -1.82
SOX4Q06945 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX4Q06945 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX4Q06945 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX4Q06945 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX4Q06945 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX4Q06945 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SOX4Q06945 AC068647.1-201ENST00000489539 2265 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX4Q06945 RNU4-15P-201ENST00000362613 141 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 Y_RNA.40-201ENST00000362645 93 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 RNU6-1205P-201ENST00000363625 106 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 Y_RNA.456-201ENST00000384232 111 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 RNU6-19P-201ENST00000384718 107 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 HSPE1P26-201ENST00000405341 275 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 RNU2-52P-201ENST00000410680 190 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 AC023141.4-201ENST00000412031 328 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 PTGES3P4-201ENST00000426243 356 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 AC006989.1-201ENST00000427212 131 ntBASIC3.7□□□□□ -1.82
SOX4Q06945 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX4Q06945 RNA5SP310-201ENST00000459084 116 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms