Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 MIR1248-201ENST00000629190 106 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SUMO3P55854 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SUMO3P55854 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.68□□□□□ -1.98
SUMO3P55854 SNORA70.4-201ENST00000365509 134 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 RNU6-611P-201ENST00000384276 104 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AC113618.1-201ENST00000416747 285 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.68□□□□□ -1.98
SUMO3P55854 FCF1P4-201ENST00000448326 183 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 RNU7-14P-201ENST00000459331 62 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AC018868.1-201ENST00000491307 315 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AC010469.2-201ENST00000496412 480 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.68□□□□□ -1.98
SUMO3P55854 RNA5SP341-201ENST00000516261 117 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 RNU6-1045P-201ENST00000516321 107 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 Y_RNA.715-201ENST00000517082 110 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 Y_RNA.720-201ENST00000517166 92 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 SNORA70.24-201ENST00000517233 118 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AC034114.1-201ENST00000520293 285 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.68□□□□□ -1.98
SUMO3P55854 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.68□□□□□ -1.98
SUMO3P55854 AC113195.1-201ENST00000579952 141 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
SUMO3P55854 U6.92-201ENST00000636464 89 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
SUMO3P55854 AC093831.2-201ENST00000624393 3427 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 AL355596.1-201ENST00000565399 3996 ntBASIC2.68□□□□□ -1.98
SUMO3P55854 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SUMO3P55854 RNU6-450P-201ENST00000364654 107 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 SNORA25B-201ENST00000365507 128 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 MIR300-201ENST00000401138 83 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AL033519.2-201ENST00000403958 392 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 MRPL35P1-201ENST00000404272 572 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AL357139.1-201ENST00000407792 426 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 MTND2P23-201ENST00000422990 651 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC009238.1-201ENST00000442165 424 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.67□□□□□ -1.98
SUMO3P55854 IFNA11P-201ENST00000446352 526 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC009237.6-201ENST00000446969 424 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.67□□□□□ -1.98
SUMO3P55854 RNU7-26P-201ENST00000458980 63 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 U8.20-201ENST00000459445 131 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC074133.1-201ENST00000515696 183 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.67□□□□□ -1.98
SUMO3P55854 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.67□□□□□ -1.98
SUMO3P55854 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.67□□□□□ -1.98
SUMO3P55854 AC074050.1-201ENST00000563247 211 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
SUMO3P55854 MIR4506-201ENST00000584693 77 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC008737.2-201ENST00000599446 118 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AL355297.3-201ENST00000604082 446 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AL162274.2-201ENST00000614406 332 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AC068205.3-201ENST00000636385 468 ntBASIC2.67□□□□□ -1.98
SUMO3P55854 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.67□□□□□ -1.98
SUMO3P55854 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SUMO3P55854 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SUMO3P55854 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SUMO3P55854 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SUMO3P55854 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SUMO3P55854 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SUMO3P55854 SNORD31B-201ENST00000364977 69 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 Y_RNA.458-201ENST00000384240 102 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 SNORA67.2-201ENST00000384300 149 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 RNU6-1072P-201ENST00000384703 107 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 RNU6-443P-201ENST00000384780 107 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 AC022018.1-201ENST00000430685 241 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 HMGN2P18-201ENST00000450680 270 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.66□□□□□ -1.98
SUMO3P55854 Y_RNA.713-201ENST00000517013 96 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 RNA5SP380-201ENST00000517190 98 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.66□□□□□ -1.98
SUMO3P55854 RRN3P3-201ENST00000549207 578 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 MIR4659A-201ENST00000580269 81 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 AC093732.2-201ENST00000607950 274 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 AL021879.1-201ENST00000611756 288 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 AC240442.1-201ENST00000616055 283 ntBASIC2.66□□□□□ -1.98
SUMO3P55854 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SUMO3P55854 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.66□□□□□ -1.98
SUMO3P55854 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SUMO3P55854 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SUMO3P55854 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
SUMO3P55854 Y_RNA.152-201ENST00000363578 100 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 RNU1-109P-201ENST00000383960 147 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 Y_RNA.471-201ENST00000384312 102 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 RNU6-1026P-201ENST00000384465 108 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 MIR586-201ENST00000385035 97 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SUMO3P55854 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 RPL19P1-201ENST00000411635 428 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.65□□□□□ -1.99
SUMO3P55854 MTND5P22-201ENST00000458380 195 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 ATP5EP1-201ENST00000510257 156 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 RNU6-667P-201ENST00000517186 102 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 NDUFA5P6-201ENST00000542110 379 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 AC233702.2-202ENST00000562547 291 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.65□□□□□ -1.99
SUMO3P55854 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
SUMO3P55854 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms