Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MIR4769-201ENST00000584126 77 ntBASIC2.1□□□□□ -2.07
LIMK2P53671 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.1□□□□□ -2.07
LIMK2P53671 MIR3976-201ENST00000606807 139 ntBASIC2.1□□□□□ -2.07
LIMK2P53671 AC133104.2-201ENST00000615272 193 ntBASIC2.1□□□□□ -2.07
LIMK2P53671 AL159153.1-201ENST00000619688 317 ntBASIC2.1□□□□□ -2.07
LIMK2P53671 uc_338.22-201ENST00000622722 187 ntBASIC2.1□□□□□ -2.07
LIMK2P53671 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
LIMK2P53671 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LIMK2P53671 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.1□□□□□ -2.07
LIMK2P53671 RNU6-1115P-201ENST00000362490 106 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 Y_RNA.31-201ENST00000362574 102 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-212P-201ENST00000362642 104 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 Y_RNA.40-201ENST00000362645 93 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-336P-201ENST00000364891 107 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-596P-201ENST00000365395 98 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-790P-201ENST00000384479 105 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-331P-201ENST00000384724 107 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 MIR559-201ENST00000385188 96 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-1106P-201ENST00000390845 107 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RPS29P13-201ENST00000402041 169 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 CBX3P9-201ENST00000402326 552 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 AL590004.1-201ENST00000405321 300 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU6-174P-201ENST00000410406 106 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 AC243428.1-201ENST00000421099 264 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 USMG5P1-201ENST00000425964 177 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RPL30P12-201ENST00000474666 353 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.09□□□□□ -2.07
LIMK2P53671 AK3P2-201ENST00000507976 429 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 SCARNA16.2-201ENST00000516520 172 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 Y_RNA.711-201ENST00000516993 102 ntBASIC2.09□□□□□ -2.07
LIMK2P53671 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.09□□□□□ -2.07
LIMK2P53671 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
LIMK2P53671 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LIMK2P53671 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
LIMK2P53671 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.08□□□□□ -2.08
LIMK2P53671 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LIMK2P53671 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 Y_RNA.2-201ENST00000362330 96 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 Y_RNA.5-201ENST00000362334 102 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 Y_RNA.112-201ENST00000363250 102 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 Y_RNA.445-201ENST00000384168 102 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 RNU6-1222P-201ENST00000384615 107 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 MIR561-201ENST00000385216 97 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 RNU6-308P-201ENST00000390957 107 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 AL023284.1-201ENST00000403956 276 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 RNU6-1245P-201ENST00000411130 106 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.08□□□□□ -2.08
LIMK2P53671 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.08□□□□□ -2.08
LIMK2P53671 PMCHL1-202ENST00000423102 261 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 AIMP1P2-201ENST00000425294 312 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 AL591806.2-201ENST00000433122 173 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LIMK2P53671 RPL39P29-201ENST00000447779 157 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
LIMK2P53671 RPS29P27-201ENST00000463711 170 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.08□□□□□ -2.08
LIMK2P53671 RNU6-120P-201ENST00000516077 103 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 CYCSP26-201ENST00000534107 320 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 BNIP3P16-201ENST00000589779 534 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 VN1R107P-201ENST00000601784 209 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 AC012640.5-201ENST00000623897 319 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 AC241585.2-209ENST00000638217 143 ntBASIC2.08□□□□□ -2.08
LIMK2P53671 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LIMK2P53671 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
LIMK2P53671 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LIMK2P53671 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 RNU6-1032P-201ENST00000384100 107 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 Y_RNA.463-201ENST00000384271 102 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 RNU6-933P-201ENST00000384424 107 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.07□□□□□ -2.08
LIMK2P53671 AC009238.1-201ENST00000442165 424 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 AC009237.6-201ENST00000446969 424 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 AL163540.1-201ENST00000485382 386 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 RNU6-470P-201ENST00000515954 104 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 ACA59.1-201ENST00000515966 143 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 RNU6-976P-201ENST00000516086 111 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 RNU6-612P-201ENST00000516909 102 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 AC097372.5-201ENST00000623665 376 ntBASIC2.07□□□□□ -2.08
LIMK2P53671 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LIMK2P53671 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LIMK2P53671 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 MIR544A-201ENST00000384855 91 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 MIR521-1-201ENST00000384902 87 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 snosnR66.1-201ENST00000391095 99 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.06□□□□□ -2.08
LIMK2P53671 AC018865.2-201ENST00000423631 129 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.06□□□□□ -2.08
LIMK2P53671 AC243964.1-201ENST00000441814 261 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.06□□□□□ -2.08
LIMK2P53671 U8.21-201ENST00000459536 136 ntBASIC2.06□□□□□ -2.08
LIMK2P53671 FO393415.2-201ENST00000480085 343 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms