Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
GDNFP39905 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
GDNFP39905 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
GDNFP39905 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.88
GDNFP39905 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.33□□□□□ -1.88
GDNFP39905 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GDNFP39905 U8.12-201ENST00000384701 133 ntBASIC3.33□□□□□ -1.88
GDNFP39905 MIR548B-201ENST00000385247 97 ntBASIC3.33□□□□□ -1.88
GDNFP39905 AC023141.4-201ENST00000412031 328 ntBASIC3.33□□□□□ -1.88
GDNFP39905 CRYBB2P1-203ENST00000415709 538 ntBASIC3.33□□□□□ -1.88
GDNFP39905 AL158823.1-201ENST00000418441 478 ntBASIC3.33□□□□□ -1.88
GDNFP39905 AC092017.2-201ENST00000427600 362 ntBASIC3.33□□□□□ -1.88
GDNFP39905 RPS29P2-201ENST00000479278 136 ntBASIC3.33□□□□□ -1.88
GDNFP39905 RNU5E-3P-201ENST00000515913 68 ntBASIC3.33□□□□□ -1.88
GDNFP39905 RNU6-589P-201ENST00000516485 107 ntBASIC3.33□□□□□ -1.88
GDNFP39905 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
GDNFP39905 MIR6716-201ENST00000613413 80 ntBASIC3.33□□□□□ -1.88
GDNFP39905 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.33□□□□□ -1.88
GDNFP39905 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.33□□□□□ -1.88
GDNFP39905 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
GDNFP39905 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GDNFP39905 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
GDNFP39905 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 SNORA31-201ENST00000362607 130 ntBASIC3.32□□□□□ -1.88
GDNFP39905 U3.8-201ENST00000363675 217 ntBASIC3.32□□□□□ -1.88
GDNFP39905 SNORA25.7-201ENST00000364375 127 ntBASIC3.32□□□□□ -1.88
GDNFP39905 SNORA57.3-201ENST00000411095 141 ntBASIC3.32□□□□□ -1.88
GDNFP39905 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
GDNFP39905 RNA5SP310-201ENST00000459084 116 ntBASIC3.32□□□□□ -1.88
GDNFP39905 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
GDNFP39905 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.32□□□□□ -1.88
GDNFP39905 SNORA70.12-201ENST00000516084 153 ntBASIC3.32□□□□□ -1.88
GDNFP39905 HSPE1P18-201ENST00000517602 280 ntBASIC3.32□□□□□ -1.88
GDNFP39905 MIR4738-201ENST00000579134 87 ntBASIC3.32□□□□□ -1.88
GDNFP39905 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
GDNFP39905 MIR6867-201ENST00000610636 67 ntBASIC3.32□□□□□ -1.88
GDNFP39905 MIR6868-201ENST00000611215 58 ntBASIC3.32□□□□□ -1.88
GDNFP39905 AL110115.1-201ENST00000614396 364 ntBASIC3.32□□□□□ -1.88
GDNFP39905 AC068647.2-201ENST00000637380 353 ntBASIC3.32□□□□□ -1.88
GDNFP39905 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GDNFP39905 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GDNFP39905 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GDNFP39905 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
GDNFP39905 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GDNFP39905 CENPCP1-201ENST00000533085 2578 ntBASIC3.31□□□□□ -1.88
GDNFP39905 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GDNFP39905 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GDNFP39905 RNU6-1010P-201ENST00000362757 107 ntBASIC3.31□□□□□ -1.88
GDNFP39905 SNORD45.3-201ENST00000363836 72 ntBASIC3.31□□□□□ -1.88
GDNFP39905 RNU6-755P-201ENST00000364400 103 ntBASIC3.31□□□□□ -1.88
GDNFP39905 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
GDNFP39905 RNU6-1336P-201ENST00000383886 109 ntBASIC3.31□□□□□ -1.88
GDNFP39905 RNU6-748P-201ENST00000384648 107 ntBASIC3.31□□□□□ -1.88
GDNFP39905 SNORA36B-201ENST00000410438 131 ntBASIC3.31□□□□□ -1.88
GDNFP39905 RNU4-43P-201ENST00000410628 137 ntBASIC3.31□□□□□ -1.88
GDNFP39905 AL356095.1-201ENST00000417217 199 ntBASIC3.31□□□□□ -1.88
GDNFP39905 AL445584.1-201ENST00000431451 330 ntBASIC3.31□□□□□ -1.88
GDNFP39905 snoU13.14-201ENST00000459372 104 ntBASIC3.31□□□□□ -1.88
GDNFP39905 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.31□□□□□ -1.88
GDNFP39905 AC090142.3-201ENST00000519012 385 ntBASIC3.31□□□□□ -1.88
GDNFP39905 AC120024.3-201ENST00000603167 156 ntBASIC3.31□□□□□ -1.88
GDNFP39905 MIR548AY-201ENST00000617669 107 ntBASIC3.31□□□□□ -1.88
GDNFP39905 MIR3914-2-201ENST00000637339 95 ntBASIC3.31□□□□□ -1.88
GDNFP39905 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
GDNFP39905 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GDNFP39905 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.31□□□□□ -1.88
GDNFP39905 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GDNFP39905 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
GDNFP39905 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GDNFP39905 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GDNFP39905 SNORD114-19-201ENST00000363072 75 ntBASIC3.3□□□□□ -1.88
GDNFP39905 Y_RNA.124-201ENST00000363339 93 ntBASIC3.3□□□□□ -1.88
GDNFP39905 RNA5SP399-201ENST00000364003 117 ntBASIC3.3□□□□□ -1.88
GDNFP39905 RNA5SP267-201ENST00000364893 126 ntBASIC3.3□□□□□ -1.88
GDNFP39905 RNU6-147P-201ENST00000383983 107 ntBASIC3.3□□□□□ -1.88
GDNFP39905 Y_RNA.584-201ENST00000391090 114 ntBASIC3.3□□□□□ -1.88
GDNFP39905 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
GDNFP39905 AL591034.1-201ENST00000407447 340 ntBASIC3.3□□□□□ -1.88
GDNFP39905 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.3□□□□□ -1.88
GDNFP39905 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
GDNFP39905 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
GDNFP39905 RNU6-772P-201ENST00000516042 105 ntBASIC3.3□□□□□ -1.88
GDNFP39905 RNU7-115P-201ENST00000516433 55 ntBASIC3.3□□□□□ -1.88
GDNFP39905 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.3□□□□□ -1.88
GDNFP39905 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
GDNFP39905 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GDNFP39905 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.3□□□□□ -1.88
GDNFP39905 AC108081.1-201ENST00000604358 221 ntBASIC3.3□□□□□ -1.88
GDNFP39905 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GDNFP39905 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.3□□□□□ -1.88
GDNFP39905 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.3□□□□□ -1.88
GDNFP39905 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms