Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 MTND5P35-201ENST00000557537 1720 ntBASIC3.13□□□□□ -1.91
TNFRSF1AP19438 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFRSF1AP19438 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 CEP170P1-201ENST00000502249 4587 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 RNU6-142P-201ENST00000384019 107 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.498-201ENST00000384460 102 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 SNORD116-21-201ENST00000384507 92 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 SNORA48.8-201ENST00000391324 134 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AL035423.1-201ENST00000420331 213 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AC112220.1-201ENST00000434628 355 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 RPL30P12-201ENST00000474666 353 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AP000867.2-201ENST00000532468 320 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AC016256.1-201ENST00000547971 354 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 MIR3121-201ENST00000579680 77 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AL391903.3-201ENST00000612158 163 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 MIR486-1-201ENST00000612171 68 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFRSF1AP19438 AL021368.2-201ENST00000606125 5352 ntBASIC3.12□□□□□ -1.91
TNFRSF1AP19438 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFRSF1AP19438 RNU6-1048P-201ENST00000364054 107 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.393-201ENST00000383936 102 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 U8.11-201ENST00000384699 133 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 U8.12-201ENST00000384701 133 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TNFRSF1AP19438 SNORA12.1-201ENST00000390873 148 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 SNORA26.2-201ENST00000390922 122 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.630-201ENST00000411370 108 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 ELOCP21-201ENST00000412558 336 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AL714022.1-201ENST00000439897 151 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AL031737.1-201ENST00000450125 223 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AC010099.1-201ENST00000455434 375 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 U8.18-201ENST00000459285 133 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.11□□□□□ -1.91
TNFRSF1AP19438 RNU6-561P-201ENST00000516222 102 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 RNU1-95P-201ENST00000516357 160 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 RNU1-128P-201ENST00000516704 160 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 MIR5571-201ENST00000577998 113 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 RNU1-30P-201ENST00000606575 163 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 MIR7851-201ENST00000610611 160 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 AL121772.2-201ENST00000614331 297 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 TNPO1P3-201ENST00000436471 2662 ntBASIC3.11□□□□□ -1.91
TNFRSF1AP19438 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFRSF1AP19438 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFRSF1AP19438 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RNU6-884P-201ENST00000363889 107 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 U8.6-201ENST00000364939 135 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RNU6-969P-201ENST00000383900 105 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 SNORA36A-201ENST00000384221 132 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.521-201ENST00000384560 114 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 SNORA75.5-201ENST00000391291 81 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 ATP5A1P2-201ENST00000412323 255 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 AC098614.2-201ENST00000426040 255 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RPS27P1-201ENST00000450552 247 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 snoU13.6-201ENST00000458785 104 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 snoU13.28-201ENST00000459235 104 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RNU6-436P-201ENST00000516171 114 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RNU6-638P-201ENST00000516582 104 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RNU6-1231P-201ENST00000517185 103 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 CYCSP23-201ENST00000519781 313 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 AC136628.3-201ENST00000521868 290 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 uc_338.28-201ENST00000612082 187 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 AP003355.3-201ENST00000623465 114 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 U2.21-201ENST00000637295 81 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF1AP19438 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 AC010329.5-201ENST00000623497 2174 ntBASIC3.1□□□□□ -1.91
TNFRSF1AP19438 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RNU6-799P-201ENST00000363567 107 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.179-201ENST00000363844 90 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RNU6-324P-201ENST00000363957 106 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RNU6-1164P-201ENST00000364428 107 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.280-201ENST00000364765 112 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 635.5 ms