Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPRAP18433 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPRAP18433 RNU6-1048P-201ENST00000364054 107 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 SNORD115-30-201ENST00000364117 82 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 RNA5SP205-201ENST00000364653 136 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 AL031003.1-201ENST00000404229 172 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 AC006989.1-201ENST00000427212 131 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 RPS4XP13-201ENST00000483219 789 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPRAP18433 RNA5SP341-201ENST00000516261 117 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 RN7SKP83-201ENST00000516512 178 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 RNU6-971P-201ENST00000516920 106 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 HIGD1AP1-201ENST00000550979 275 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 MIR3658-201ENST00000636291 56 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPRAP18433 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PTPRAP18433 AC010329.5-201ENST00000623497 2174 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 AC058791.1-201ENST00000608412 3198 ntBASIC3.93□□□□□ -1.78
PTPRAP18433 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPRAP18433 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRAP18433 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRAP18433 MAPK10-373ENST00000641983 6772 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRAP18433 RNU6-103P-201ENST00000363686 107 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 Y_RNA.293-201ENST00000364908 93 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 SNORA20-201ENST00000384662 132 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 HMGN2P8-201ENST00000391458 268 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 RPL23AP48-201ENST00000406913 488 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 MTND4LP9-201ENST00000427694 174 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 AC027124.2-201ENST00000428249 105 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPRAP18433 AC107626.1-201ENST00000471084 183 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 AC006445.1-201ENST00000491925 405 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.92□□□□□ -1.78
PTPRAP18433 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.92□□□□□ -1.78
PTPRAP18433 AC022616.8-201ENST00000533569 253 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.92□□□□□ -1.78
PTPRAP18433 MIR4298-201ENST00000584380 73 ntBASIC3.92□□□□□ -1.78
PTPRAP18433 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.92□□□□□ -1.78
PTPRAP18433 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRAP18433 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRAP18433 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRAP18433 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRAP18433 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRAP18433 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRAP18433 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.91□□□□□ -1.78
PTPRAP18433 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRAP18433 AC068647.1-201ENST00000489539 2265 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 Y_RNA.40-201ENST00000362645 93 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 RNU6-529P-201ENST00000363383 104 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 Y_RNA.218-201ENST00000364218 104 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 Y_RNA.287-201ENST00000364853 94 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRAP18433 Y_RNA.572-201ENST00000384757 98 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 RNA5SP201-201ENST00000410316 124 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 RPL30P13-201ENST00000418873 348 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPRAP18433 AL137159.1-201ENST00000452808 512 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 snoU13.28-201ENST00000459235 104 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 AC114982.1-201ENST00000469402 321 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
PTPRAP18433 AC107027.2-201ENST00000512197 115 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 RNU1-61P-201ENST00000516107 151 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 RNU1-117P-201ENST00000517041 158 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 PCGEM1.1-201ENST00000613431 131 ntBASIC3.91□□□□□ -1.78
PTPRAP18433 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.91□□□□□ -1.78
PTPRAP18433 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRAP18433 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.9□□□□□ -1.78
PTPRAP18433 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTPRAP18433 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PTPRAP18433 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.9□□□□□ -1.78
PTPRAP18433 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRAP18433 RNU6-899P-201ENST00000363947 107 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 RNU6-215P-201ENST00000365169 102 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 Y_RNA.353-201ENST00000365440 108 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 SNORA72.4-201ENST00000384174 132 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 Y_RNA.510-201ENST00000384511 114 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 SNORA8.3-201ENST00000384679 139 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 MIR626-201ENST00000385032 94 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 AC023141.4-201ENST00000412031 328 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 PTGES3P4-201ENST00000426243 356 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPRAP18433 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
PTPRAP18433 AC004386.2-201ENST00000441858 148 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 RNU6-1333P-201ENST00000516162 93 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 LARP7P3-201ENST00000579888 337 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.9□□□□□ -1.79
PTPRAP18433 MIR3609-201ENST00000582661 80 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 DNAJC19P2-201ENST00000593340 302 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 AC020914.4-201ENST00000597690 277 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 AC091152.3-201ENST00000604227 325 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 SNORD11B-201ENST00000607707 90 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 AC005562.2-201ENST00000618264 111 ntBASIC3.9□□□□□ -1.79
PTPRAP18433 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PTPRAP18433 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRAP18433 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRAP18433 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTPRAP18433 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPRAP18433 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PTPRAP18433 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms