Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-91P-201ENST00000607774 107 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-1298P-201ENST00000362456 101 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD115-8-201ENST00000363856 82 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-275P-201ENST00000364910 107 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD115-38-201ENST00000365037 82 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 RNU2-52P-201ENST00000410680 190 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 RNA5SP104-201ENST00000410989 118 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 AC025281.1-201ENST00000567026 265 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 AL162713.1-201ENST00000604480 262 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 AL138963.2-201ENST00000605137 226 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 AC008873.1-201ENST00000625051 138 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 MIR3658-201ENST00000636291 56 ntBASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.59□□□□□ -1.67
CSB-PGBD3P0DP91 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CSB-PGBD3P0DP91 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.59□□□□□ -1.68
CSB-PGBD3P0DP91 AC110774.1-201ENST00000623567 2018 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 SNORA40.19-201ENST00000390846 128 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 Y_RNA.595-201ENST00000410403 105 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 COTL1P1-201ENST00000422309 375 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC012306.1-201ENST00000423267 114 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AL358075.3-201ENST00000426289 226 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-1211P-201ENST00000459179 105 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-579P-201ENST00000516879 102 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 MIR5004-201ENST00000579078 107 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 RPS15AP11-201ENST00000594193 385 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC010999.1-201ENST00000611856 324 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC091932.3-201ENST00000624223 323 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 MAPK10-373ENST00000641983 6772 ntBASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSB-PGBD3P0DP91 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AP000705.1-201ENST00000454567 350 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-625P-201ENST00000459412 107 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AL121594.1-201ENST00000475906 575 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AC090525.1-201ENST00000479116 478 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-155P-201ENST00000516347 100 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 SNORA31.16-201ENST00000516773 139 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-1198P-201ENST00000516904 67 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AC100767.1-201ENST00000528178 123 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AP002001.1-203ENST00000534002 267 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AL391813.1-201ENST00000603098 260 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AC004467.1-201ENST00000615678 330 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CSB-PGBD3P0DP91 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 AC073073.2-201ENST00000609827 2578 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-381P-201ENST00000391259 108 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 RPL30P13-201ENST00000418873 348 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 S100A11P2-201ENST00000467589 312 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 Y_RNA.797-201ENST00000515977 94 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 AC018448.1-201ENST00000552843 316 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 MIR4474-201ENST00000579189 78 ntBASIC4.56□□□□□ -1.68
CSB-PGBD3P0DP91 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 Y_RNA.542-201ENST00000384641 111 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 CYCSP48-201ENST00000417124 323 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 U8.19-201ENST00000459095 133 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 RPL27AP5-201ENST00000469428 449 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 RN7SL594P-201ENST00000470590 287 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 AIG1P1-201ENST00000503376 148 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 RNU4-57P-201ENST00000515980 135 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 SNORD98-201ENST00000636377 67 ntBASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CSB-PGBD3P0DP91 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 AC068700.1-201ENST00000565862 3754 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 SNORA63.4-201ENST00000362763 126 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 Y_RNA.510-201ENST00000384511 114 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 RNU6-763P-201ENST00000390865 106 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 RN7SKP111-201ENST00000410349 271 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 RPS26P42-201ENST00000413485 326 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 EBAG9P1-201ENST00000418955 543 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 AL365496.1-201ENST00000426885 215 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 AC091179.1-201ENST00000461606 579 ntBASIC4.54□□□□□ -1.68
CSB-PGBD3P0DP91 YWHAEP4-201ENST00000505390 198 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms