Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC103996.1-201ENST00000555468 102 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC006362.1-201ENST00000567392 174 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A1P02462 AC010620.1-201ENST00000601088 1102 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC073410.2-201ENST00000603240 332 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 PCGEM1.1-201ENST00000613431 131 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 U1.36-201ENST00000620684 176 ntBASIC0.81□□□□□ -2.28
COL4A1P02462 Y_RNA.255-201ENST00000364581 97 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 RNU4-56P-201ENST00000364700 142 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 RNU6-438P-201ENST00000365561 103 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 RNU6-160P-201ENST00000384591 107 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 RNA5SP201-201ENST00000410316 124 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AC010975.2-201ENST00000427781 588 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.8□□□□□ -2.28
COL4A1P02462 AC008628.2-201ENST00000502605 298 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.8□□□□□ -2.28
COL4A1P02462 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.8□□□□□ -2.28
COL4A1P02462 Y_RNA.688-201ENST00000516565 95 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AC115990.1-201ENST00000526957 301 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AP003392.2-201ENST00000527269 208 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 MIR3136-201ENST00000583498 78 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AC012507.3-201ENST00000603556 477 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AC104073.3-201ENST00000610942 955 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AL158063.1-201ENST00000615349 536 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 AP000770.2-201ENST00000623694 100 ntBASIC0.8□□□□□ -2.28
COL4A1P02462 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
COL4A1P02462 Y_RNA.332-201ENST00000365271 113 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 SNORA16.2-201ENST00000390991 127 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AF228730.1-201ENST00000397972 663 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AC002486.1-201ENST00000435098 391 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 RNU6-1037P-201ENST00000459571 107 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A1P02462 SNORD27.1-201ENST00000516319 72 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.79□□□□□ -2.28
COL4A1P02462 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.79□□□□□ -2.28
COL4A1P02462 AC034114.1-201ENST00000520293 285 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AP002963.1-201ENST00000530590 184 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A1P02462 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A1P02462 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A1P02462 AC073648.5-201ENST00000603502 305 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AC107304.1-201ENST00000604229 296 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A1P02462 AC009509.4-201ENST00000619202 509 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 AC068792.1-201ENST00000621354 417 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.79□□□□□ -2.28
COL4A1P02462 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL4A1P02462 ZNF680P1-201ENST00000436625 1469 ntBASIC0.79□□□□□ -2.28
COL4A1P02462 CBX3P1-201ENST00000325243 554 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNU6-82P-201ENST00000363970 107 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNU6-1164P-201ENST00000364428 107 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNU6-715P-201ENST00000365204 103 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNU6-996P-201ENST00000365438 107 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 Y_RNA.381-201ENST00000365666 102 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A1P02462 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.78□□□□□ -2.28
COL4A1P02462 SNORD14D-201ENST00000384390 87 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNY3P9-201ENST00000384727 106 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RN7SKP61-201ENST00000410642 295 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNU4-46P-201ENST00000410818 138 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 UBE2V1P4-201ENST00000425374 344 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AC133104.1-201ENST00000429100 218 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AL133396.1-201ENST00000432048 687 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.78□□□□□ -2.28
COL4A1P02462 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A1P02462 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A1P02462 RPL9P9-202ENST00000466501 579 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.78□□□□□ -2.28
COL4A1P02462 AC010493.1-201ENST00000513479 292 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNU11-2P-201ENST00000516898 142 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 RNA5SP503-201ENST00000517047 117 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
COL4A1P02462 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A1P02462 AP000763.2-201ENST00000540641 163 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 TRAV32-201ENST00000553993 340 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AC022254.1-201ENST00000567857 235 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 Z94722.1-201ENST00000604328 474 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AC008147.4-201ENST00000617570 1204 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AC120349.3-201ENST00000624377 529 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 SNORD98-201ENST00000636377 67 ntBASIC0.78□□□□□ -2.28
COL4A1P02462 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.78□□□□□ -2.28
COL4A1P02462 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
COL4A1P02462 SNORA25.8-201ENST00000364831 128 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 Y_RNA.296-201ENST00000364930 108 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 Y_RNA.399-201ENST00000383955 105 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 SNORD116-9-201ENST00000384000 95 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 RNU6-190P-201ENST00000384154 102 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 SNORD116-3-201ENST00000384287 95 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 SNORD116-7-201ENST00000384404 95 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 SNORD116-5-201ENST00000384462 95 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 RNU6-1274P-201ENST00000384557 107 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 SNORD73A-201ENST00000386062 65 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.78□□□□□ -2.29
COL4A1P02462 MTCO3P41-201ENST00000414801 328 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.78□□□□□ -2.29
COL4A1P02462 AC090960.1-201ENST00000421072 306 ntBASIC0.78□□□□□ -2.29
COL4A1P02462 MTCYBP8-201ENST00000422855 651 ntBASIC0.78□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms