Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS4BO75351 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
VPS4BO75351 Y_RNA.668-201ENST00000516233 93 ntBASIC2.9□□□□□ -1.95
VPS4BO75351 Y_RNA.713-201ENST00000517013 96 ntBASIC2.9□□□□□ -1.95
VPS4BO75351 GTF3AP2-201ENST00000557014 266 ntBASIC2.9□□□□□ -1.95
VPS4BO75351 UBL5P4-201ENST00000562584 236 ntBASIC2.9□□□□□ -1.95
VPS4BO75351 PCGEM1.1-201ENST00000613431 131 ntBASIC2.9□□□□□ -1.95
VPS4BO75351 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS4BO75351 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS4BO75351 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS4BO75351 RNU6-238P-201ENST00000363313 106 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 RNU6-1145P-201ENST00000384246 107 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 Y_RNA.518-201ENST00000384552 113 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 MIR329-1-201ENST00000385028 80 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 SNORD67-201ENST00000390833 111 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 SNORD78.2-201ENST00000391076 69 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 SNORA26.7-201ENST00000391288 122 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 MIR887-201ENST00000401258 79 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 EEF1A1P41-201ENST00000414667 207 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS4BO75351 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS4BO75351 MRPS36P2-201ENST00000512569 299 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 AC007536.1-201ENST00000533382 349 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 MIR3671-201ENST00000580455 88 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 AC240442.1-201ENST00000616055 283 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 AC005296.1-201ENST00000616145 209 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
VPS4BO75351 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS4BO75351 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS4BO75351 OR56A5-201ENST00000340110 738 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 Y_RNA.26-201ENST00000362539 101 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 RNU6-280P-201ENST00000364145 104 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 RNU6-702P-201ENST00000364982 107 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 Y_RNA.401-201ENST00000383965 117 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 RNU6-245P-201ENST00000384020 107 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 RNU6-472P-201ENST00000384299 107 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 Y_RNA.512-201ENST00000384518 102 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 MT-TG-201ENST00000387429 68 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 AL139095.1-201ENST00000404326 391 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 RPL23AP58-201ENST00000440453 469 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS4BO75351 LINC01399-202ENST00000458450 244 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 RNU2-53P-201ENST00000516257 147 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS4BO75351 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS4BO75351 AC090115.4-201ENST00000609970 188 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 AC130454.1-201ENST00000622948 401 ntBASIC2.88□□□□□ -1.95
VPS4BO75351 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS4BO75351 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
VPS4BO75351 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS4BO75351 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 Y_RNA.222-201ENST00000364264 102 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 SNORA68.1-201ENST00000364537 132 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 RNU6-806P-201ENST00000365147 105 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 RNU6-378P-201ENST00000384324 107 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 RNU6-121P-201ENST00000410525 99 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 RNU6-1328P-201ENST00000410938 106 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 RNA5SP508-201ENST00000411327 119 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS4BO75351 AC112220.1-201ENST00000434628 355 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS4BO75351 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS4BO75351 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS4BO75351 RNA5SP112-201ENST00000515937 99 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 RNA5SP367-201ENST00000516557 118 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AC107016.2-201ENST00000547968 190 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 EIF4A1P12-201ENST00000551910 141 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS4BO75351 MIR4659A-201ENST00000580269 81 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 MIR4765-201ENST00000585007 77 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AC008739.2-201ENST00000597006 317 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS4BO75351 AC026241.1-201ENST00000517873 2142 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AL355596.1-201ENST00000565399 3996 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 AC010329.5-201ENST00000623497 2174 ntBASIC2.87□□□□□ -1.95
VPS4BO75351 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS4BO75351 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS4BO75351 Y_RNA.19-201ENST00000362462 99 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 RNA5SP361-201ENST00000362686 118 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 Y_RNA.64-201ENST00000362845 102 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 RNU6-486P-201ENST00000363116 107 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 Y_RNA.105-201ENST00000363182 111 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 RNU5F-3P-201ENST00000363767 117 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 RNU6-879P-201ENST00000364328 108 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 Y_RNA.439-201ENST00000384119 94 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 SNORD115-46-201ENST00000390982 71 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 MIR208B-201ENST00000401172 77 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 AC007395.1-201ENST00000451333 677 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 RPL26P26-201ENST00000480251 434 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 AC091826.1-201ENST00000514065 313 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 RNU6-397P-201ENST00000516226 104 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 SNORA40.15-201ENST00000516884 107 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS4BO75351 AC093023.1-201ENST00000547375 507 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 MIR5695-201ENST00000579717 85 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 AC103810.1-201ENST00000579873 453 ntBASIC2.86□□□□□ -1.95
VPS4BO75351 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms