Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR4782-201ENST00000577987 79 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AC010928.2-201ENST00000588017 287 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AC009779.6-201ENST00000603972 165 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AC098479.1-201ENST00000609225 154 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SMAD6O43541 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMAD6O43541 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SMAD6O43541 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
SMAD6O43541 AC009541.1-201ENST00000438279 2662 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 Y_RNA.16-201ENST00000362421 102 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 RNU6-222P-201ENST00000362438 107 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 RNA5SP68-201ENST00000363885 119 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 Y_RNA.462-201ENST00000384268 102 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 BTF3L4P2-201ENST00000392798 346 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AL079342.1-201ENST00000401460 267 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AL603910.2-201ENST00000407268 136 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 U3.37-201ENST00000408528 213 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 RNU2-20P-201ENST00000410425 191 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AC092047.1-201ENST00000424997 240 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.65□□□□□ -1.99
SMAD6O43541 MRPS36P2-201ENST00000512569 299 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 SNORA43.2-201ENST00000516652 128 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 RNU6-1183P-201ENST00000517054 60 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AC010186.2-204ENST00000537668 439 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AC130289.1-201ENST00000577321 73 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AL450472.1-202ENST00000637286 180 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 AC241585.2-209ENST00000638217 143 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD6O43541 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.99
SMAD6O43541 LINC02555-201ENST00000563933 1951 ntBASIC2.65□□□□□ -1.99
SMAD6O43541 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMAD6O43541 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD6O43541 AC233981.2-201ENST00000611524 1614 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.64□□□□□ -1.99
SMAD6O43541 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
SMAD6O43541 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.64□□□□□ -1.99
SMAD6O43541 Y_RNA.54-201ENST00000362766 105 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 RNU6-527P-201ENST00000363425 104 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 RNU4-9P-201ENST00000364951 139 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMAD6O43541 MRPL35P1-201ENST00000404272 572 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 PIGPP3-201ENST00000425307 415 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AL591043.1-201ENST00000432461 424 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMAD6O43541 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD6O43541 RPS3P1-201ENST00000456781 192 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 snoU13.30-201ENST00000458951 104 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 RPL23AP49-201ENST00000492925 468 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.64□□□□□ -1.99
SMAD6O43541 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD6O43541 SNORA31.6-201ENST00000516241 130 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 RNA5SP282-201ENST00000516355 108 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 RNA5SP148-201ENST00000516527 94 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 MIR2355-201ENST00000517199 87 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 RNU1-104P-201ENST00000517280 175 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC022868.1-201ENST00000517767 391 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC109329.2-201ENST00000519658 482 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.64□□□□□ -1.99
SMAD6O43541 RRN3P3-201ENST00000549207 578 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC023824.2-201ENST00000566185 400 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC090617.3-201ENST00000573670 475 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 MIR3616-201ENST00000584070 92 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.64□□□□□ -1.99
SMAD6O43541 MIR6817-201ENST00000615588 66 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC011476.5-201ENST00000615594 130 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 AC240442.1-201ENST00000616055 283 ntBASIC2.64□□□□□ -1.99
SMAD6O43541 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMAD6O43541 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SMAD6O43541 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SMAD6O43541 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMAD6O43541 Y_RNA.65-201ENST00000362846 100 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 SNORD81.1-201ENST00000363064 77 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 SNORA68.1-201ENST00000364537 132 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 Y_RNA.277-201ENST00000364754 102 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 Y_RNA.352-201ENST00000365439 102 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU6-898P-201ENST00000365627 104 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU6-968P-201ENST00000384076 107 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 Y_RNA.785-201ENST00000384290 109 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU6-658P-201ENST00000384606 106 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 Y_RNA.541-201ENST00000384640 113 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 MIR518D-201ENST00000385014 87 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 AC099548.1-201ENST00000421443 426 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 PRELID3BP1-201ENST00000457142 540 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 SRIP1-201ENST00000489235 288 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RPL23AP75-201ENST00000491601 451 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU6-1338P-201ENST00000516328 91 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU5B-3P-201ENST00000516601 115 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU6-1012P-201ENST00000516606 109 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 RNU6-182P-201ENST00000516970 105 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.63□□□□□ -1.99
SMAD6O43541 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 Y_RNA.772-201ENST00000606692 102 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 SCARNA4-201ENST00000629045 128 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 U2.21-201ENST00000637295 81 ntBASIC2.63□□□□□ -1.99
SMAD6O43541 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.63□□□□□ -1.99
SMAD6O43541 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMAD6O43541 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMAD6O43541 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.62□□□□□ -1.99
SMAD6O43541 AC022336.2-201ENST00000568966 2538 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms