Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SNORA51.11-201ENST00000384442 131 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 Y_RNA.526-201ENST00000384572 110 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AL356057.3-201ENST00000402607 340 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 RNU6-101P-201ENST00000410323 104 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 RNU2-25P-201ENST00000411041 191 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 RNU6-1001P-201ENST00000411265 100 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 RPS29P26-201ENST00000477483 171 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.78□□□□□ -1.96
PHGDHO43175 RNU5F-4P-201ENST00000516581 114 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 RNU6-826P-201ENST00000516827 104 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 Y_RNA.720-201ENST00000517166 92 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 Y_RNA.721-201ENST00000517207 102 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AC040926.1-201ENST00000530195 238 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AP002404.1-201ENST00000532005 451 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 RPL17P51-201ENST00000605218 238 ntBASIC2.78□□□□□ -1.96
PHGDHO43175 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.78□□□□□ -1.96
PHGDHO43175 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PHGDHO43175 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PHGDHO43175 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PHGDHO43175 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 RNY3P4-201ENST00000384428 101 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 MIR561-201ENST00000385216 97 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 RNU6-823P-201ENST00000391042 103 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 RPS23P5-201ENST00000495419 428 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 RNU6-764P-201ENST00000516396 105 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.77□□□□□ -1.97
PHGDHO43175 ZNF861P-201ENST00000588126 639 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 AL162730.1-201ENST00000605734 292 ntBASIC2.77□□□□□ -1.97
PHGDHO43175 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
PHGDHO43175 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PHGDHO43175 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.76□□□□□ -1.97
PHGDHO43175 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
PHGDHO43175 Y_RNA.27-201ENST00000362540 103 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 Y_RNA.179-201ENST00000363844 90 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 RNU6-234P-201ENST00000365229 104 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 SNORA18.3-201ENST00000384122 132 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 RNU6-793P-201ENST00000384233 104 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 RNU6-318P-201ENST00000384283 103 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 MIR483-201ENST00000385070 76 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.76□□□□□ -1.97
PHGDHO43175 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.76□□□□□ -1.97
PHGDHO43175 AC010095.1-201ENST00000443543 144 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.76□□□□□ -1.97
PHGDHO43175 U8.20-201ENST00000459445 131 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AC093852.1-201ENST00000503587 266 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.76□□□□□ -1.97
PHGDHO43175 RNA5SP341-201ENST00000516261 117 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 SNORA74D-201ENST00000516404 141 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 RNU6-1098P-201ENST00000516772 96 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AC022616.4-201ENST00000522985 181 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AC022616.8-201ENST00000533569 253 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PHGDHO43175 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.76□□□□□ -1.97
PHGDHO43175 AC113195.1-201ENST00000579952 141 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 MIR3605-201ENST00000583214 100 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AC124312.5-201ENST00000604451 268 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AL161756.2-201ENST00000604597 246 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PHGDHO43175 AL078596.1-201ENST00000624856 447 ntBASIC2.76□□□□□ -1.97
PHGDHO43175 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.76□□□□□ -1.97
PHGDHO43175 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHGDHO43175 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PHGDHO43175 Y_RNA.153-201ENST00000363615 91 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 SNORA9-201ENST00000384215 133 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 Y_RNA.455-201ENST00000384230 98 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 MIR329-1-201ENST00000385028 80 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.75□□□□□ -1.97
PHGDHO43175 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.75□□□□□ -1.97
PHGDHO43175 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.75□□□□□ -1.97
PHGDHO43175 AC009237.7-201ENST00000447357 229 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 RNU7-26P-201ENST00000458980 63 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.75□□□□□ -1.97
PHGDHO43175 Y_RNA.683-201ENST00000516508 93 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 RN7SKP49-201ENST00000516675 260 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 AC109329.2-201ENST00000519658 482 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 HSPE1P20-201ENST00000538133 289 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 MIR4325-201ENST00000583049 90 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PHGDHO43175 AL355596.1-201ENST00000565399 3996 ntBASIC2.75□□□□□ -1.97
PHGDHO43175 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
PHGDHO43175 MIR26A1-201ENST00000362205 77 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 RNU1-62P-201ENST00000362599 164 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 RNU1-76P-201ENST00000362903 159 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 RNU6-727P-201ENST00000363592 107 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 RNU6-743P-201ENST00000364151 106 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 RNU6-851P-201ENST00000384565 107 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 SNORD78.2-201ENST00000391076 69 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 SNORA48.5-201ENST00000391143 135 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 AL033519.2-201ENST00000403958 392 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 AC004866.1-201ENST00000411748 78 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.74□□□□□ -1.97
PHGDHO43175 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms