Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 DEFB117-201ENST00000602356 141 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AP003355.3-201ENST00000623465 114 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.59□□□□□ -1.84
UPK3BL1B0FP48 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
UPK3BL1B0FP48 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 U3.40-201ENST00000408706 208 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AC027124.2-201ENST00000428249 105 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 TMSB4XP3-201ENST00000445144 114 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 RPS29P26-201ENST00000477483 171 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 RPL23AP94-201ENST00000512518 302 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 RNA5SP112-201ENST00000515937 99 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 RNU7-200P-201ENST00000516105 62 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AC009127.3-201ENST00000570531 403 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 MIR3144-201ENST00000579460 79 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AL133393.1-201ENST00000603277 287 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AP001486.2-201ENST00000561652 5113 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 AC069528.2-201ENST00000624849 1991 ntBASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
UPK3BL1B0FP48 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 RNU6-454P-201ENST00000364292 107 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.329-201ENST00000365209 107 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 SNORD113-1-201ENST00000365321 69 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.510-201ENST00000384511 114 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 MIR613-201ENST00000385248 95 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 SNORA48.5-201ENST00000391143 135 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 RNU1-101P-201ENST00000391171 127 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 MIR548I2-201ENST00000408348 149 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 MIR1289-1-201ENST00000408836 144 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 AC097463.2-201ENST00000421074 142 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 AC145146.1-201ENST00000496370 254 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 RNU6-1219P-201ENST00000516143 112 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 RNU2-44P-201ENST00000516795 194 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 MIR5006-201ENST00000583027 110 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 AL078604.3-201ENST00000615580 211 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 MIR6852-201ENST00000621699 66 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK3BL1B0FP48 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 RNU6-1027P-201ENST00000383998 107 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AL357139.1-201ENST00000407792 426 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 U3.39-201ENST00000408569 239 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 RNU6-1135P-201ENST00000411083 103 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AC004866.1-201ENST00000411748 78 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 RPL31P41-201ENST00000477967 372 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 RNU6-107P-201ENST00000516643 102 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 MIR4325-201ENST00000583049 90 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 MIR4765-201ENST00000585007 77 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AC107294.3-201ENST00000609211 526 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AL008718.3-201ENST00000610217 321 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 U4.6-201ENST00000621618 127 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AP003122.5-201ENST00000527668 3766 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 AC000403.1-201ENST00000613696 3585 ntBASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.56□□□□□ -1.84
UPK3BL1B0FP48 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 RNU6-486P-201ENST00000363116 107 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 RNA5SP42-201ENST00000364278 115 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 MIR1183-201ENST00000408856 89 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 AL451074.5-201ENST00000415894 435 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 BTF3P11-201ENST00000426582 477 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 AC006989.1-201ENST00000427212 131 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 GABRG2-229ENST00000641017 3628 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms