Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNU6-978P-201ENST00000364371 103 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNU1-44P-201ENST00000384453 163 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 AL139095.1-201ENST00000404326 391 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 SNORA11F-201ENST00000408237 128 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP317-201ENST00000410176 116 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 MIR1911-201ENST00000410783 80 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP311-201ENST00000411290 116 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 SNRPGP5-201ENST00000456003 220 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP20-201ENST00000515976 84 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP315-201ENST00000516340 116 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 Y_RNA.690-201ENST00000516603 95 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP312-201ENST00000517068 116 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 uc_338.13-201ENST00000618243 179 ntBASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HRH3Q9Y5N1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 SNORD32B-201ENST00000364460 84 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 Y_RNA.346-201ENST00000365385 112 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 SNORD14D-201ENST00000384390 87 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 MIR134-201ENST00000385258 73 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 RPS26P8-201ENST00000393490 348 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 SNORD65B-201ENST00000459126 73 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 Y_RNA.651-201ENST00000459380 103 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 AC080013.2-201ENST00000460866 323 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 MIR2114-201ENST00000516645 80 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 AC027419.1-201ENST00000522976 328 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 RN7SL600P-201ENST00000581811 299 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 AC090517.3-201ENST00000625170 141 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 MIR492-201ENST00000638676 116 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 AC008555.8-201ENST00000623602 2168 ntBASIC3.95□□□□□ -1.78
HRH3Q9Y5N1 AC018555.1-201ENST00000567548 1980 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 Y_RNA.280-201ENST00000364765 112 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 RNU6-484P-201ENST00000384016 107 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 AL603914.1-201ENST00000401964 204 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 MIR1294-201ENST00000408503 142 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP519-201ENST00000516480 119 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 AC107934.2-201ENST00000518653 310 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 IFITM8P-201ENST00000522529 394 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 AC140479.6-201ENST00000633535 357 ntBASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HRH3Q9Y5N1 MFSD8-242ENST00000641690 4199 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 MIR372-201ENST00000362225 67 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 SNORD58C-201ENST00000365223 64 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 SNORA72-201ENST00000384339 132 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 RNU6-880P-201ENST00000384526 107 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 SNORD66.1-201ENST00000391230 76 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC097463.2-201ENST00000421074 142 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AL157831.1-201ENST00000426134 473 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 RNA5SP49-201ENST00000516450 115 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 RNU6-126P-201ENST00000516685 103 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC074050.1-201ENST00000563247 211 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC110741.2-201ENST00000605278 268 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC004832.5-201ENST00000608677 401 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 RMST_8.1-201ENST00000610287 165 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC006435.5-201ENST00000624486 112 ntBASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HRH3Q9Y5N1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HRH3Q9Y5N1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.92□□□□□ -1.78
HRH3Q9Y5N1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HRH3Q9Y5N1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms