Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AP001486.2-201ENST00000561652 5113 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AC000403.1-201ENST00000613696 3585 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-1325P-201ENST00000364905 105 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 RPS26P55-201ENST00000471178 356 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 AC099522.1-202ENST00000514718 367 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 AC127455.1-201ENST00000565496 145 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 MIR4277-201ENST00000578298 84 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 U7.2-201ENST00000607576 63 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 MIR6820-201ENST00000611508 62 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 CR392039.5-201ENST00000623201 510 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 ZNF702P-202ENST00000434269 1966 ntBASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA11Q9Y5H2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-44P-201ENST00000384045 107 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 SNORA37-201ENST00000384504 129 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-460P-201ENST00000391158 108 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-588P-201ENST00000410281 105 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 SNORD65B-201ENST00000459126 73 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-221P-201ENST00000459541 99 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 RPL23AP54-201ENST00000495129 419 ntBASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA11Q9Y5H2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 MAPK10-372ENST00000641954 3413 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AC009487.4-201ENST00000624969 3585 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-486P-201ENST00000363116 107 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-1056P-201ENST00000383996 107 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-437P-201ENST00000459408 95 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 RN7SL271P-201ENST00000487601 295 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AC090142.3-201ENST00000519012 385 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AC106785.1-201ENST00000565935 262 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AC114781.5-201ENST00000615297 108 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 AC012640.5-201ENST00000623897 319 ntBASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA11Q9Y5H2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 MIR383-201ENST00000362257 73 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-975P-201ENST00000384296 105 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 SNORD14D-201ENST00000384390 87 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RHEBP3-201ENST00000411920 351 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RN7SL459P-201ENST00000481078 302 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RPL29P14-201ENST00000495837 428 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RNA5SP20-201ENST00000515976 84 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-948P-201ENST00000516374 107 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 AC011944.2-201ENST00000624440 683 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 MIR3653-201ENST00000625572 110 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 AL049781.1-201ENST00000623195 3585 ntBASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA11Q9Y5H2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
PCDHGA11Q9Y5H2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
PCDHGA11Q9Y5H2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 CENPCP1-201ENST00000533085 2578 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC007256.1-201ENST00000392253 2765 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORA60-201ENST00000362396 134 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-674P-201ENST00000363831 107 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORD45.3-201ENST00000363836 72 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-234P-201ENST00000365229 104 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-597P-201ENST00000365620 102 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC068538.1-201ENST00000376856 336 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-1080P-201ENST00000383982 107 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORD116-13-201ENST00000384408 92 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.622-201ENST00000411091 108 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AL135786.1-201ENST00000415892 214 ntBASIC3.96□□□□□ -1.78
PCDHGA11Q9Y5H2 AC006011.1-201ENST00000442758 349 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms