Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNU6-1104P-201ENST00000384723 104 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-938P-201ENST00000411285 103 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 AC004941.2-201ENST00000427009 228 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 snoU13.1-201ENST00000459157 104 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 AC108751.2-201ENST00000469993 231 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 AC073073.1-201ENST00000493920 463 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 RNA5SP468-201ENST00000516782 93 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU7-172P-201ENST00000517125 64 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 AP001880.2-201ENST00000538233 448 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 PARP1P2-201ENST00000556806 195 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 FAM35CP-201ENST00000554755 2470 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 AC009487.4-201ENST00000624969 3585 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RNA5SP191-201ENST00000362585 102 ntBASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RPL21P65-201ENST00000406094 466 ntBASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-402P-201ENST00000410678 103 ntBASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RPL35AP21-201ENST00000437667 333 ntBASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RPL21P129-201ENST00000491732 478 ntBASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-948P-201ENST00000516374 107 ntBASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA4Q9Y5G9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 SNORA33-201ENST00000363664 130 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 RNA5SP39-201ENST00000411245 120 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AL513477.1-202ENST00000417061 214 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC004552.1-201ENST00000419089 348 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC112771.1-201ENST00000463581 102 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 RPS26P3-201ENST00000470205 348 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC090543.2-201ENST00000483963 348 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC004057.1-201ENST00000485827 348 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU7-123P-201ENST00000515911 60 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-1018P-201ENST00000516577 106 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC004486.1-201ENST00000546846 233 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 MIR4438-201ENST00000585271 93 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC008739.2-201ENST00000597006 317 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AC019206.1-201ENST00000621938 425 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 AL136964.1-201ENST00000622038 2990 ntBASIC4.73□□□□□ -1.65
PCDHGA4Q9Y5G9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-170P-201ENST00000362832 104 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 Y_RNA.242-201ENST00000364473 110 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU1-133P-201ENST00000364867 167 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 SNORA2.2-201ENST00000365473 135 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 RNA5SP372-201ENST00000390836 115 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 MIR298-201ENST00000401212 88 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 VDAC1P3-201ENST00000434069 851 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-795P-201ENST00000516323 103 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 AC022523.2-201ENST00000561045 150 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 AC012531.4-201ENST00000616509 177 ntBASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA4Q9Y5G9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.71□□□□□ -1.65
PCDHGA4Q9Y5G9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
PCDHGA4Q9Y5G9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 SNORD115-13-201ENST00000363358 82 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 SNORD115-16-201ENST00000363887 82 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 SNORD115-1-201ENST00000364961 82 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 RNY1P6-201ENST00000384193 109 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 MIR518F-201ENST00000384973 87 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 MIR93-201ENST00000385024 80 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 MIR1183-201ENST00000408856 89 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 RNA5SP129-201ENST00000410276 118 ntBASIC4.71□□□□□ -1.66
PCDHGA4Q9Y5G9 Y_RNA.621-201ENST00000411065 96 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms