Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 MIR4658-201ENST00000584344 65 ntBASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 AC078899.3-201ENST00000599065 212 ntBASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 AC116312.1-201ENST00000606841 314 ntBASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 AC087588.2-201ENST00000617667 426 ntBASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 uc_338.22-201ENST00000622722 187 ntBASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LSM4Q9Y4Z0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RNU5F-3P-201ENST00000363767 117 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-280P-201ENST00000364145 104 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.813-201ENST00000364639 102 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-234P-201ENST00000365229 104 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.557-201ENST00000384680 107 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 MIR10B-201ENST00000385011 110 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 SNORA69.1-201ENST00000390904 137 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AL078595.1-201ENST00000404458 226 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RN7SKP284-201ENST00000411002 343 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 MRPS18CP6-201ENST00000423587 223 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 WARS2P1-201ENST00000429678 537 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 USP9YP16-201ENST00000430287 407 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC022018.1-201ENST00000430685 241 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC004386.2-201ENST00000441858 148 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AL137792.2-201ENST00000443484 235 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RPL39P40-201ENST00000445481 146 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 USP9YP23-201ENST00000455085 407 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC105758.1-201ENST00000506038 399 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 SNORA9.3-201ENST00000516383 129 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RNA5SP367-201ENST00000516557 118 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-667P-201ENST00000517186 102 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 MIR2355-201ENST00000517199 87 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 DEFB131C-201ENST00000528817 165 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC243829.7-201ENST00000633081 225 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
LSM4Q9Y4Z0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.28□□□□□ -2.05
LSM4Q9Y4Z0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 MIR369-201ENST00000362155 70 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 Y_RNA.314-201ENST00000365114 102 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 RNU1-115P-201ENST00000365329 160 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 SNORA9.2-201ENST00000365361 133 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 Y_RNA.358-201ENST00000365491 99 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 U8.9-201ENST00000365667 134 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 RNU6-281P-201ENST00000384212 103 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 MIR549A-201ENST00000385268 96 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 EIF1P2-201ENST00000428233 350 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 MTCO3P8-201ENST00000453691 755 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 RNU7-87P-201ENST00000459343 62 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 RPS29P26-201ENST00000477483 171 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 Y_RNA.701-201ENST00000516812 110 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 AC107016.2-201ENST00000547968 190 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 SNRPGP18-201ENST00000553000 214 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 MIR3605-201ENST00000583214 100 ntBASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LSM4Q9Y4Z0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 RNU1-62P-201ENST00000362599 164 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 Y_RNA.128-201ENST00000363391 112 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 Y_RNA.394-201ENST00000383942 103 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 Y_RNA.592-201ENST00000410274 109 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AC114482.1-201ENST00000418010 247 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 MTCO2P12-201ENST00000427426 682 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AL135938.1-201ENST00000443141 297 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AC096638.1-201ENST00000444678 216 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AC009237.7-201ENST00000447357 229 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 SNORA25.14-201ENST00000516481 132 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 UBL5P4-201ENST00000562584 236 ntBASIC2.26□□□□□ -2.05
LSM4Q9Y4Z0 MIR5006-201ENST00000583027 110 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms