Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SNORD116-1-201ENST00000384335 95 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 MIR1267-201ENST00000408723 78 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC099677.2-201ENST00000436385 175 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 MTCO2P16-201ENST00000436962 677 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC092473.1-201ENST00000441098 221 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC073415.1-201ENST00000449240 153 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 RNU1-123P-201ENST00000458950 160 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC010531.2-201ENST00000465012 153 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 RPL9P9-202ENST00000466501 579 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 HMGB1P33-201ENST00000563485 527 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AC069114.2-201ENST00000604699 304 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 AL359821.1-201ENST00000605519 182 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.42□□□□□ -2.18
CDH9Q9ULB4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDH9Q9ULB4 ELL2P3-201ENST00000457883 1602 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 MIR520A-201ENST00000384862 85 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 SNORD73A-201ENST00000386062 65 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 RNU1-78P-201ENST00000391248 165 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 DEFB108C-201ENST00000400154 252 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH9Q9ULB4 CDK8P2-201ENST00000415020 547 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 MTCO1P21-201ENST00000416634 589 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AC073464.1-201ENST00000429823 534 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH9Q9ULB4 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AP003034.1-201ENST00000534621 422 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AC004223.2-201ENST00000590309 544 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AL391646.1-201ENST00000603860 190 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH9Q9ULB4 HULC.1-201ENST00000612720 240 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 AC009541.1-201ENST00000438279 2662 ntBASIC1.41□□□□□ -2.18
CDH9Q9ULB4 MTND5P10-201ENST00000603719 1809 ntBASIC1.4□□□□□ -2.18
CDH9Q9ULB4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 Y_RNA.359-201ENST00000365498 102 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 SNORD116-9-201ENST00000384000 95 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 RNU6-1103P-201ENST00000384150 107 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 SNORD116-3-201ENST00000384287 95 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 SNORD116-7-201ENST00000384404 95 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 SNORD116-5-201ENST00000384462 95 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 RNU6-360P-201ENST00000390944 104 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 EBAG9P1-201ENST00000418955 543 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 SDAD1P3-201ENST00000427380 333 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 MTCO2P19-201ENST00000427513 598 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 C8orf59P1-201ENST00000429930 303 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH9Q9ULB4 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 RPL26P26-201ENST00000480251 434 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AL163973.1-201ENST00000484753 577 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AC010424.1-201ENST00000506336 297 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 CCDC34P1-201ENST00000507441 517 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AC091133.4-201ENST00000511142 308 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AP003033.1-201ENST00000527244 415 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AC016256.1-201ENST00000547971 354 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.4□□□□□ -2.19
CDH9Q9ULB4 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.4□□□□□ -2.19
CDH9Q9ULB4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDH9Q9ULB4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU6-862P-201ENST00000362804 105 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNA5SP219-201ENST00000390940 113 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AL606923.1-201ENST00000406616 190 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU6-321P-201ENST00000410912 106 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AL353193.1-201ENST00000421444 268 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 USP9YP28-201ENST00000435142 589 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 HSPE1P9-201ENST00000440046 311 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 MTCO2P18-201ENST00000457151 658 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU6-956P-201ENST00000458868 103 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU6-1037P-201ENST00000459571 107 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AC004223.1-201ENST00000479840 271 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RPL36AP21-201ENST00000490372 323 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RPL39P5-202ENST00000512505 151 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 SNORA14.1-201ENST00000516113 141 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU6-612P-201ENST00000516909 102 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 MTND2P38-201ENST00000522536 667 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AC006362.1-201ENST00000567392 174 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 MIR4424-201ENST00000585257 86 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms